Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DTX4Q9Y2E6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DTX4Q9Y2E6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DTX4Q9Y2E6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DTX4Q9Y2E6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DTX4Q9Y2E6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DTX4Q9Y2E6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DTX4Q9Y2E6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
DTX4Q9Y2E6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DTX4Q9Y2E6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.81■□□□□ 0.6
DTX4Q9Y2E6 AC142086.2-201ENST00000569753 217 ntBASIC18.81■□□□□ 0.6
DTX4Q9Y2E6 AC092118.2-201ENST00000613495 667 ntBASIC18.81■□□□□ 0.6
DTX4Q9Y2E6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.81■□□□□ 0.6
DTX4Q9Y2E6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.81■□□□□ 0.6
DTX4Q9Y2E6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DTX4Q9Y2E6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DTX4Q9Y2E6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.81■□□□□ 0.6
DTX4Q9Y2E6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.81■□□□□ 0.6
DTX4Q9Y2E6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 GABARAPL3-202ENST00000624044 1851 ntBASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 DUSP5P2-201ENST00000426873 1033 ntBASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DTX4Q9Y2E6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 AL512408.1-201ENST00000569378 2000 ntBASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 SMG8-203ENST00000578922 2178 ntBASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.79■□□□□ 0.6
DTX4Q9Y2E6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 MIR4758-201ENST00000577688 71 ntBASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DTX4Q9Y2E6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.77■□□□□ 0.6
DTX4Q9Y2E6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DTX4Q9Y2E6 DPP3P2-201ENST00000416030 1696 ntBASIC18.77■□□□□ 0.6
DTX4Q9Y2E6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.77■□□□□ 0.6
DTX4Q9Y2E6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
DTX4Q9Y2E6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
DTX4Q9Y2E6 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.77■□□□□ 0.6
DTX4Q9Y2E6 AC069152.1-201ENST00000438030 544 ntBASIC18.77■□□□□ 0.6
DTX4Q9Y2E6 AC091874.3-201ENST00000512672 1195 ntBASIC18.77■□□□□ 0.6
DTX4Q9Y2E6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.77■□□□□ 0.6
DTX4Q9Y2E6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms