Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMP2BQ9UQN3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP2BQ9UQN3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP2BQ9UQN3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP2BQ9UQN3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMP2BQ9UQN3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.58■□□□□ 0.89
CHMP2BQ9UQN3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP2BQ9UQN3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.58■□□□□ 0.89
CHMP2BQ9UQN3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.58■□□□□ 0.89
CHMP2BQ9UQN3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMP2BQ9UQN3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMP2BQ9UQN3 AC004854.2-201ENST00000608450 1441 ntBASIC20.58■□□□□ 0.88
CHMP2BQ9UQN3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
CHMP2BQ9UQN3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.58■□□□□ 0.88
CHMP2BQ9UQN3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMP2BQ9UQN3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMP2BQ9UQN3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.58■□□□□ 0.88
CHMP2BQ9UQN3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 MIR638-201ENST00000385237 100 ntBASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 YBX1P1-201ENST00000445822 960 ntBASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 KRT18P20-201ENST00000548986 1279 ntBASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 RBM17P2-201ENST00000616397 1405 ntBASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP2BQ9UQN3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 AC007322.3-201ENST00000426526 701 ntBASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 KRT18P14-201ENST00000534205 1250 ntBASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 DPP3P2-201ENST00000416030 1696 ntBASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CHMP2BQ9UQN3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.55■□□□□ 0.88
CHMP2BQ9UQN3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP2BQ9UQN3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP2BQ9UQN3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.55■□□□□ 0.88
CHMP2BQ9UQN3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.55■□□□□ 0.88
CHMP2BQ9UQN3 AC243732.1-201ENST00000612648 864 ntBASIC20.55■□□□□ 0.88
CHMP2BQ9UQN3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.55■□□□□ 0.88
CHMP2BQ9UQN3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP2BQ9UQN3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP2BQ9UQN3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CHMP2BQ9UQN3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP2BQ9UQN3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP2BQ9UQN3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.55■□□□□ 0.88
CHMP2BQ9UQN3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 KRT8P36-201ENST00000489121 1440 ntBASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms