Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBQLN1Q9UMX0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.78■■□□□ 1.08
UBQLN1Q9UMX0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.78■■□□□ 1.08
UBQLN1Q9UMX0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.78■■□□□ 1.08
UBQLN1Q9UMX0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBQLN1Q9UMX0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UBQLN1Q9UMX0 AL390719.1-204ENST00000412397 1219 ntBASIC21.78■■□□□ 1.08
UBQLN1Q9UMX0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.78■■□□□ 1.08
UBQLN1Q9UMX0 AC128676.1-201ENST00000454392 318 ntBASIC21.78■■□□□ 1.08
UBQLN1Q9UMX0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.78■■□□□ 1.08
UBQLN1Q9UMX0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBQLN1Q9UMX0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
UBQLN1Q9UMX0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBQLN1Q9UMX0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UBQLN1Q9UMX0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UBQLN1Q9UMX0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBQLN1Q9UMX0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UBQLN1Q9UMX0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBQLN1Q9UMX0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBQLN1Q9UMX0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.77■■□□□ 1.08
UBQLN1Q9UMX0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.77■■□□□ 1.08
UBQLN1Q9UMX0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.77■■□□□ 1.08
UBQLN1Q9UMX0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBQLN1Q9UMX0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBQLN1Q9UMX0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBQLN1Q9UMX0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
UBQLN1Q9UMX0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBQLN1Q9UMX0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.77■■□□□ 1.08
UBQLN1Q9UMX0 AC023632.3-201ENST00000521633 145 ntBASIC21.77■■□□□ 1.08
UBQLN1Q9UMX0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBQLN1Q9UMX0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBQLN1Q9UMX0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.77■■□□□ 1.08
UBQLN1Q9UMX0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
UBQLN1Q9UMX0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 PRORSD1P-201ENST00000295112 541 ntBASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 AC008687.6-201ENST00000596318 630 ntBASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.76■■□□□ 1.07
UBQLN1Q9UMX0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 KRT17P3-201ENST00000420566 1262 ntBASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 AC006557.6-201ENST00000623071 864 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms