Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HACD3Q9P035 AC006970.2-201ENST00000450065 779 ntBASIC20.46■□□□□ 0.87
HACD3Q9P035 AF201337.1-201ENST00000520239 748 ntBASIC20.46■□□□□ 0.87
HACD3Q9P035 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.46■□□□□ 0.87
HACD3Q9P035 AL356652.1-201ENST00000615962 565 ntBASIC20.46■□□□□ 0.87
HACD3Q9P035 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HACD3Q9P035 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HACD3Q9P035 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
HACD3Q9P035 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.46■□□□□ 0.87
HACD3Q9P035 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HACD3Q9P035 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HACD3Q9P035 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HACD3Q9P035 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HACD3Q9P035 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.45■□□□□ 0.86
HACD3Q9P035 AC010980.2-201ENST00000587099 1412 ntBASIC20.45■□□□□ 0.86
HACD3Q9P035 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
HACD3Q9P035 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HACD3Q9P035 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.45■□□□□ 0.86
HACD3Q9P035 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.45■□□□□ 0.86
HACD3Q9P035 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HACD3Q9P035 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.45■□□□□ 0.86
HACD3Q9P035 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
HACD3Q9P035 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HACD3Q9P035 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HACD3Q9P035 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HACD3Q9P035 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.45■□□□□ 0.86
HACD3Q9P035 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HACD3Q9P035 AL050303.2-201ENST00000619798 666 ntBASIC20.45■□□□□ 0.86
HACD3Q9P035 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HACD3Q9P035 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HACD3Q9P035 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.45■□□□□ 0.86
HACD3Q9P035 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.45■□□□□ 0.86
HACD3Q9P035 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HACD3Q9P035 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HACD3Q9P035 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HACD3Q9P035 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HACD3Q9P035 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.44■□□□□ 0.86
HACD3Q9P035 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
HACD3Q9P035 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.44■□□□□ 0.86
HACD3Q9P035 AIRN-201ENST00000601203 4374 ntBASIC20.44■□□□□ 0.86
HACD3Q9P035 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HACD3Q9P035 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HACD3Q9P035 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.44■□□□□ 0.86
HACD3Q9P035 CYP2T3P-201ENST00000601990 817 ntBASIC20.44■□□□□ 0.86
HACD3Q9P035 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
HACD3Q9P035 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HACD3Q9P035 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HACD3Q9P035 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
HACD3Q9P035 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.44■□□□□ 0.86
HACD3Q9P035 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HACD3Q9P035 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
HACD3Q9P035 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
HACD3Q9P035 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HACD3Q9P035 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HACD3Q9P035 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HACD3Q9P035 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
HACD3Q9P035 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HACD3Q9P035 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HACD3Q9P035 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.43■□□□□ 0.86
HACD3Q9P035 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HACD3Q9P035 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HACD3Q9P035 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HACD3Q9P035 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.43■□□□□ 0.86
HACD3Q9P035 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HACD3Q9P035 KRT18P68-201ENST00000392293 1000 ntBASIC20.43■□□□□ 0.86
HACD3Q9P035 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.43■□□□□ 0.86
HACD3Q9P035 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.43■□□□□ 0.86
HACD3Q9P035 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.43■□□□□ 0.86
HACD3Q9P035 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.43■□□□□ 0.86
HACD3Q9P035 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.43■□□□□ 0.86
HACD3Q9P035 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HACD3Q9P035 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HACD3Q9P035 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
HACD3Q9P035 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HACD3Q9P035 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HACD3Q9P035 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HACD3Q9P035 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HACD3Q9P035 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
HACD3Q9P035 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
HACD3Q9P035 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HACD3Q9P035 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HACD3Q9P035 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HACD3Q9P035 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HACD3Q9P035 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HACD3Q9P035 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HACD3Q9P035 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HACD3Q9P035 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.42■□□□□ 0.86
HACD3Q9P035 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.42■□□□□ 0.86
HACD3Q9P035 AC093787.1-201ENST00000450396 207 ntBASIC20.42■□□□□ 0.86
HACD3Q9P035 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HACD3Q9P035 AC105036.2-201ENST00000569468 176 ntBASIC20.42■□□□□ 0.86
HACD3Q9P035 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
HACD3Q9P035 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.42■□□□□ 0.86
HACD3Q9P035 AL121832.2-201ENST00000610979 668 ntBASIC20.42■□□□□ 0.86
HACD3Q9P035 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HACD3Q9P035 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.42■□□□□ 0.86
HACD3Q9P035 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HACD3Q9P035 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HACD3Q9P035 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.42■□□□□ 0.86
HACD3Q9P035 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms