Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NLGN3Q9NZ94 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.87■□□□□ 0.77
NLGN3Q9NZ94 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NLGN3Q9NZ94 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NLGN3Q9NZ94 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NLGN3Q9NZ94 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NLGN3Q9NZ94 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.87■□□□□ 0.77
NLGN3Q9NZ94 AL024507.2-201ENST00000606070 2574 ntBASIC19.87■□□□□ 0.77
NLGN3Q9NZ94 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.86■□□□□ 0.77
NLGN3Q9NZ94 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NLGN3Q9NZ94 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NLGN3Q9NZ94 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.86■□□□□ 0.77
NLGN3Q9NZ94 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NLGN3Q9NZ94 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.86■□□□□ 0.77
NLGN3Q9NZ94 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NLGN3Q9NZ94 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NLGN3Q9NZ94 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NLGN3Q9NZ94 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NLGN3Q9NZ94 AC133681.1-201ENST00000465482 601 ntBASIC19.86■□□□□ 0.77
NLGN3Q9NZ94 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.86■□□□□ 0.77
NLGN3Q9NZ94 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.86■□□□□ 0.77
NLGN3Q9NZ94 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NLGN3Q9NZ94 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NLGN3Q9NZ94 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NLGN3Q9NZ94 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.86■□□□□ 0.77
NLGN3Q9NZ94 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.86■□□□□ 0.77
NLGN3Q9NZ94 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 AC012618.2-201ENST00000428058 849 ntBASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 AC124016.1-201ENST00000609552 612 ntBASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NLGN3Q9NZ94 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.84■□□□□ 0.77
NLGN3Q9NZ94 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.84■□□□□ 0.77
NLGN3Q9NZ94 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NLGN3Q9NZ94 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NLGN3Q9NZ94 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NLGN3Q9NZ94 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NLGN3Q9NZ94 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.84■□□□□ 0.77
NLGN3Q9NZ94 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.84■□□□□ 0.77
NLGN3Q9NZ94 AC239809.2-201ENST00000415381 517 ntBASIC19.84■□□□□ 0.77
NLGN3Q9NZ94 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.84■□□□□ 0.77
NLGN3Q9NZ94 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.84■□□□□ 0.77
NLGN3Q9NZ94 AC006557.6-201ENST00000623071 864 ntBASIC19.84■□□□□ 0.77
NLGN3Q9NZ94 AC073912.3-201ENST00000624414 853 ntBASIC19.84■□□□□ 0.77
NLGN3Q9NZ94 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NLGN3Q9NZ94 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NLGN3Q9NZ94 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NLGN3Q9NZ94 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.84■□□□□ 0.77
NLGN3Q9NZ94 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NLGN3Q9NZ94 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NLGN3Q9NZ94 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.83■□□□□ 0.77
NLGN3Q9NZ94 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.83■□□□□ 0.77
NLGN3Q9NZ94 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
NLGN3Q9NZ94 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.83■□□□□ 0.77
NLGN3Q9NZ94 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.83■□□□□ 0.77
NLGN3Q9NZ94 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NLGN3Q9NZ94 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NLGN3Q9NZ94 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.83■□□□□ 0.77
NLGN3Q9NZ94 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NLGN3Q9NZ94 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.83■□□□□ 0.77
NLGN3Q9NZ94 AC233702.5-201ENST00000584107 538 ntBASIC19.83■□□□□ 0.77
NLGN3Q9NZ94 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NLGN3Q9NZ94 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
NLGN3Q9NZ94 AL023875.1-201ENST00000640777 796 ntBASIC19.83■□□□□ 0.77
NLGN3Q9NZ94 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NLGN3Q9NZ94 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
NLGN3Q9NZ94 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NLGN3Q9NZ94 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
NLGN3Q9NZ94 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
NLGN3Q9NZ94 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NLGN3Q9NZ94 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NLGN3Q9NZ94 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms