Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 AC010141.2-201ENST00000452426 721 ntBASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIN7CQ9NUP9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.78■□□□□ 0.28
LIN7CQ9NUP9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIN7CQ9NUP9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LIN7CQ9NUP9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIN7CQ9NUP9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LIN7CQ9NUP9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIN7CQ9NUP9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.78■□□□□ 0.28
LIN7CQ9NUP9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIN7CQ9NUP9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIN7CQ9NUP9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LIN7CQ9NUP9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIN7CQ9NUP9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIN7CQ9NUP9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LIN7CQ9NUP9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.78■□□□□ 0.28
LIN7CQ9NUP9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIN7CQ9NUP9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
LIN7CQ9NUP9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LIN7CQ9NUP9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 AC112907.3-201ENST00000577781 2400 ntBASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 AC245052.3-201ENST00000450182 901 ntBASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 KRT18P61-201ENST00000585825 1298 ntBASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LIN7CQ9NUP9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LIN7CQ9NUP9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.77■□□□□ 0.27
LIN7CQ9NUP9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LIN7CQ9NUP9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LIN7CQ9NUP9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LIN7CQ9NUP9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LIN7CQ9NUP9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.77■□□□□ 0.27
LIN7CQ9NUP9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LIN7CQ9NUP9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms