Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TLR9Q9NR96 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TLR9Q9NR96 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TLR9Q9NR96 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TLR9Q9NR96 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TLR9Q9NR96 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TLR9Q9NR96 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TLR9Q9NR96 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
TLR9Q9NR96 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TLR9Q9NR96 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TLR9Q9NR96 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TLR9Q9NR96 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.59■■□□□ 1.05
TLR9Q9NR96 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TLR9Q9NR96 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.59■■□□□ 1.05
TLR9Q9NR96 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TLR9Q9NR96 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
TLR9Q9NR96 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TLR9Q9NR96 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.58■■□□□ 1.05
TLR9Q9NR96 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TLR9Q9NR96 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TLR9Q9NR96 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TLR9Q9NR96 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TLR9Q9NR96 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TLR9Q9NR96 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TLR9Q9NR96 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.58■■□□□ 1.05
TLR9Q9NR96 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.58■■□□□ 1.05
TLR9Q9NR96 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TLR9Q9NR96 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
TLR9Q9NR96 AP003071.4-201ENST00000562276 1284 ntBASIC21.58■■□□□ 1.05
TLR9Q9NR96 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
TLR9Q9NR96 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TLR9Q9NR96 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TLR9Q9NR96 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TLR9Q9NR96 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.04
TLR9Q9NR96 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TLR9Q9NR96 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TLR9Q9NR96 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TLR9Q9NR96 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TLR9Q9NR96 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TLR9Q9NR96 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TLR9Q9NR96 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.57■■□□□ 1.04
TLR9Q9NR96 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.57■■□□□ 1.04
TLR9Q9NR96 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TLR9Q9NR96 AL353708.3-201ENST00000610272 989 ntBASIC21.57■■□□□ 1.04
TLR9Q9NR96 AL121829.2-201ENST00000620908 328 ntBASIC21.57■■□□□ 1.04
TLR9Q9NR96 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TLR9Q9NR96 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TLR9Q9NR96 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TLR9Q9NR96 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
TLR9Q9NR96 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.56■■□□□ 1.04
TLR9Q9NR96 AC233723.2-201ENST00000623798 2106 ntBASIC21.56■■□□□ 1.04
TLR9Q9NR96 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TLR9Q9NR96 EP400NL-214ENST00000641289 2402 ntBASIC21.56■■□□□ 1.04
TLR9Q9NR96 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TLR9Q9NR96 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.56■■□□□ 1.04
TLR9Q9NR96 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TLR9Q9NR96 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.56■■□□□ 1.04
TLR9Q9NR96 AL355355.2-201ENST00000442321 338 ntBASIC21.56■■□□□ 1.04
TLR9Q9NR96 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.56■■□□□ 1.04
TLR9Q9NR96 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
TLR9Q9NR96 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.56■■□□□ 1.04
TLR9Q9NR96 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.56■■□□□ 1.04
TLR9Q9NR96 AF186192.3-201ENST00000583427 947 ntBASIC21.56■■□□□ 1.04
TLR9Q9NR96 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TLR9Q9NR96 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.56■■□□□ 1.04
TLR9Q9NR96 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TLR9Q9NR96 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TLR9Q9NR96 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
TLR9Q9NR96 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TLR9Q9NR96 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TLR9Q9NR96 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.56■■□□□ 1.04
TLR9Q9NR96 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TLR9Q9NR96 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TLR9Q9NR96 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TLR9Q9NR96 HTR7P1-201ENST00000538670 1336 ntBASIC21.55■■□□□ 1.04
TLR9Q9NR96 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TLR9Q9NR96 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
TLR9Q9NR96 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
TLR9Q9NR96 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.55■■□□□ 1.04
TLR9Q9NR96 AC242852.2-201ENST00000615738 1807 ntBASIC21.55■■□□□ 1.04
TLR9Q9NR96 KRT16P5-201ENST00000455284 522 ntBASIC21.55■■□□□ 1.04
TLR9Q9NR96 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.55■■□□□ 1.04
TLR9Q9NR96 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TLR9Q9NR96 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.55■■□□□ 1.04
TLR9Q9NR96 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.55■■□□□ 1.04
TLR9Q9NR96 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.55■■□□□ 1.04
TLR9Q9NR96 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TLR9Q9NR96 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.55■■□□□ 1.04
TLR9Q9NR96 CD177P1-201ENST00000606252 935 ntBASIC21.55■■□□□ 1.04
TLR9Q9NR96 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.55■■□□□ 1.04
TLR9Q9NR96 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TLR9Q9NR96 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TLR9Q9NR96 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TLR9Q9NR96 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.55■■□□□ 1.04
TLR9Q9NR96 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TLR9Q9NR96 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TLR9Q9NR96 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TLR9Q9NR96 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TLR9Q9NR96 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TLR9Q9NR96 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms