Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 POU5F1P3-201ENST00000428824 1078 ntBASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 C2orf69P4-201ENST00000565394 541 ntBASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 AC027702.1-201ENST00000563810 1770 ntBASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 TMEM191A-211ENST00000637163 1067 ntBASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSBP3Q9BWW4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 AC092368.3-202ENST00000574180 1591 ntBASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 UNC93B5-201ENST00000530315 699 ntBASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSBP3Q9BWW4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 ESRRAP1-201ENST00000400596 1257 ntBASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 AF106564.1-201ENST00000607058 2553 ntBASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSBP3Q9BWW4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSBP3Q9BWW4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SSBP3Q9BWW4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSBP3Q9BWW4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.85■□□□□ 0.29
SSBP3Q9BWW4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSBP3Q9BWW4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSBP3Q9BWW4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.85■□□□□ 0.29
SSBP3Q9BWW4 PNMA6B-201ENST00000538162 1200 ntBASIC16.85■□□□□ 0.29
SSBP3Q9BWW4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSBP3Q9BWW4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.85■□□□□ 0.29
SSBP3Q9BWW4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
SSBP3Q9BWW4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms