Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRGV9Q99603 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV9Q99603 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV9Q99603 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV9Q99603 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV9Q99603 RBM17P2-201ENST00000616397 1405 ntBASIC15.79■□□□□ 0.12
TRGV9Q99603 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV9Q99603 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV9Q99603 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV9Q99603 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV9Q99603 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV9Q99603 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV9Q99603 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV9Q99603 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.79■□□□□ 0.12
TRGV9Q99603 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV9Q99603 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV9Q99603 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.79■□□□□ 0.12
TRGV9Q99603 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.79■□□□□ 0.12
TRGV9Q99603 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.79■□□□□ 0.12
TRGV9Q99603 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.79■□□□□ 0.12
TRGV9Q99603 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.79■□□□□ 0.12
TRGV9Q99603 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV9Q99603 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV9Q99603 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV9Q99603 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV9Q99603 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.79■□□□□ 0.12
TRGV9Q99603 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.79■□□□□ 0.12
TRGV9Q99603 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV9Q99603 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.78■□□□□ 0.12
TRGV9Q99603 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV9Q99603 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV9Q99603 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV9Q99603 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.78■□□□□ 0.12
TRGV9Q99603 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV9Q99603 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV9Q99603 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV9Q99603 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV9Q99603 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.78■□□□□ 0.12
TRGV9Q99603 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV9Q99603 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV9Q99603 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRGV9Q99603 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.78■□□□□ 0.12
TRGV9Q99603 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.78■□□□□ 0.12
TRGV9Q99603 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.78■□□□□ 0.12
TRGV9Q99603 DPP3P2-201ENST00000416030 1696 ntBASIC15.78■□□□□ 0.12
TRGV9Q99603 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV9Q99603 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV9Q99603 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.78■□□□□ 0.12
TRGV9Q99603 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV9Q99603 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV9Q99603 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV9Q99603 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.78■□□□□ 0.12
TRGV9Q99603 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV9Q99603 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV9Q99603 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRGV9Q99603 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV9Q99603 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV9Q99603 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV9Q99603 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV9Q99603 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV9Q99603 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV9Q99603 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV9Q99603 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.77■□□□□ 0.12
TRGV9Q99603 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.77■□□□□ 0.12
TRGV9Q99603 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.77■□□□□ 0.12
TRGV9Q99603 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.77■□□□□ 0.12
TRGV9Q99603 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.77■□□□□ 0.12
TRGV9Q99603 TERF1P2-201ENST00000583350 1212 ntBASIC15.77■□□□□ 0.12
TRGV9Q99603 AC005837.3-201ENST00000612163 286 ntBASIC15.77■□□□□ 0.12
TRGV9Q99603 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
TRGV9Q99603 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRGV9Q99603 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRGV9Q99603 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRGV9Q99603 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.77■□□□□ 0.11
TRGV9Q99603 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV9Q99603 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.76■□□□□ 0.11
TRGV9Q99603 TMEM179-206ENST00000616017 1645 ntBASIC15.76■□□□□ 0.11
TRGV9Q99603 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV9Q99603 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.76■□□□□ 0.11
TRGV9Q99603 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV9Q99603 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRGV9Q99603 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV9Q99603 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV9Q99603 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV9Q99603 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV9Q99603 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.76■□□□□ 0.11
TRGV9Q99603 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV9Q99603 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV9Q99603 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV9Q99603 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
TRGV9Q99603 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV9Q99603 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.76■□□□□ 0.11
TRGV9Q99603 CDV3P1-201ENST00000471403 739 ntBASIC15.76■□□□□ 0.11
TRGV9Q99603 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRGV9Q99603 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.76■□□□□ 0.11
TRGV9Q99603 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRGV9Q99603 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV9Q99603 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV9Q99603 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.76■□□□□ 0.11
TRGV9Q99603 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms