Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SNX18Q96RF0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX18Q96RF0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX18Q96RF0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX18Q96RF0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX18Q96RF0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SNX18Q96RF0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX18Q96RF0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX18Q96RF0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX18Q96RF0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX18Q96RF0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX18Q96RF0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.38■□□□□ 0.53
SNX18Q96RF0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX18Q96RF0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.38■□□□□ 0.53
SNX18Q96RF0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.38■□□□□ 0.53
SNX18Q96RF0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.38■□□□□ 0.53
SNX18Q96RF0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.38■□□□□ 0.53
SNX18Q96RF0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX18Q96RF0 KRT18P14-201ENST00000534205 1250 ntBASIC18.38■□□□□ 0.53
SNX18Q96RF0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX18Q96RF0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX18Q96RF0 AC020907.5-201ENST00000624372 1936 ntBASIC18.38■□□□□ 0.53
SNX18Q96RF0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX18Q96RF0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.38■□□□□ 0.53
SNX18Q96RF0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX18Q96RF0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX18Q96RF0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX18Q96RF0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SNX18Q96RF0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.38■□□□□ 0.53
SNX18Q96RF0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.38■□□□□ 0.53
SNX18Q96RF0 AC027702.1-201ENST00000563810 1770 ntBASIC18.37■□□□□ 0.53
SNX18Q96RF0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX18Q96RF0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX18Q96RF0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX18Q96RF0 AC098818.2-201ENST00000564925 2320 ntBASIC18.37■□□□□ 0.53
SNX18Q96RF0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX18Q96RF0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX18Q96RF0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.37■□□□□ 0.53
SNX18Q96RF0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX18Q96RF0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX18Q96RF0 TERF1P2-201ENST00000583350 1212 ntBASIC18.37■□□□□ 0.53
SNX18Q96RF0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.37■□□□□ 0.53
SNX18Q96RF0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SNX18Q96RF0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX18Q96RF0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX18Q96RF0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SNX18Q96RF0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX18Q96RF0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX18Q96RF0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX18Q96RF0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX18Q96RF0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.37■□□□□ 0.53
SNX18Q96RF0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX18Q96RF0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX18Q96RF0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX18Q96RF0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.36■□□□□ 0.53
SNX18Q96RF0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX18Q96RF0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.36■□□□□ 0.53
SNX18Q96RF0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SNX18Q96RF0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
SNX18Q96RF0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SNX18Q96RF0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX18Q96RF0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX18Q96RF0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX18Q96RF0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX18Q96RF0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.36■□□□□ 0.53
SNX18Q96RF0 NTF6G-201ENST00000591094 616 ntBASIC18.36■□□□□ 0.53
SNX18Q96RF0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.36■□□□□ 0.53
SNX18Q96RF0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX18Q96RF0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX18Q96RF0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX18Q96RF0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX18Q96RF0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX18Q96RF0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX18Q96RF0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNX18Q96RF0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNX18Q96RF0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SNX18Q96RF0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX18Q96RF0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX18Q96RF0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SNX18Q96RF0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX18Q96RF0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX18Q96RF0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX18Q96RF0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.35■□□□□ 0.53
SNX18Q96RF0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX18Q96RF0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX18Q96RF0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX18Q96RF0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX18Q96RF0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
SNX18Q96RF0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX18Q96RF0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX18Q96RF0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX18Q96RF0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX18Q96RF0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX18Q96RF0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SNX18Q96RF0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX18Q96RF0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX18Q96RF0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX18Q96RF0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX18Q96RF0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX18Q96RF0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms