Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 AC124283.5-201ENST00000624661 1809 ntBASIC21.76■■□□□ 1.07
CASD1Q96PB1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CASD1Q96PB1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CASD1Q96PB1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CASD1Q96PB1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CASD1Q96PB1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CASD1Q96PB1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.76■■□□□ 1.07
CASD1Q96PB1 LINC01023-201ENST00000606054 436 ntBASIC21.76■■□□□ 1.07
CASD1Q96PB1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CASD1Q96PB1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.76■■□□□ 1.07
CASD1Q96PB1 AL117328.2-201ENST00000624617 1940 ntBASIC21.76■■□□□ 1.07
CASD1Q96PB1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CASD1Q96PB1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.76■■□□□ 1.07
CASD1Q96PB1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CASD1Q96PB1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CASD1Q96PB1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CASD1Q96PB1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CASD1Q96PB1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CASD1Q96PB1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CASD1Q96PB1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CASD1Q96PB1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.75■■□□□ 1.07
CASD1Q96PB1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.75■■□□□ 1.07
CASD1Q96PB1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CASD1Q96PB1 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.75■■□□□ 1.07
CASD1Q96PB1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.75■■□□□ 1.07
CASD1Q96PB1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.75■■□□□ 1.07
CASD1Q96PB1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.75■■□□□ 1.07
CASD1Q96PB1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.75■■□□□ 1.07
CASD1Q96PB1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.75■■□□□ 1.07
CASD1Q96PB1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.75■■□□□ 1.07
CASD1Q96PB1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CASD1Q96PB1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CASD1Q96PB1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CASD1Q96PB1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CASD1Q96PB1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CASD1Q96PB1 FBXW4P1-201ENST00000426721 2239 ntBASIC21.75■■□□□ 1.07
CASD1Q96PB1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
CASD1Q96PB1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CASD1Q96PB1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.74■■□□□ 1.07
CASD1Q96PB1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.74■■□□□ 1.07
CASD1Q96PB1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CASD1Q96PB1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.74■■□□□ 1.07
CASD1Q96PB1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.74■■□□□ 1.07
CASD1Q96PB1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CASD1Q96PB1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.74■■□□□ 1.07
CASD1Q96PB1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.74■■□□□ 1.07
CASD1Q96PB1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.74■■□□□ 1.07
CASD1Q96PB1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.74■■□□□ 1.07
CASD1Q96PB1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CASD1Q96PB1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.74■■□□□ 1.07
CASD1Q96PB1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CASD1Q96PB1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.74■■□□□ 1.07
CASD1Q96PB1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CASD1Q96PB1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CASD1Q96PB1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.74■■□□□ 1.07
CASD1Q96PB1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CASD1Q96PB1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CASD1Q96PB1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CASD1Q96PB1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.74■■□□□ 1.07
CASD1Q96PB1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CASD1Q96PB1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CASD1Q96PB1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.73■■□□□ 1.07
CASD1Q96PB1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.73■■□□□ 1.07
CASD1Q96PB1 AL024507.2-201ENST00000606070 2574 ntBASIC21.73■■□□□ 1.07
CASD1Q96PB1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CASD1Q96PB1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CASD1Q96PB1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
CASD1Q96PB1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CASD1Q96PB1 FAM210CP-201ENST00000445714 574 ntBASIC21.73■■□□□ 1.07
CASD1Q96PB1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.73■■□□□ 1.07
CASD1Q96PB1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CASD1Q96PB1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.73■■□□□ 1.07
CASD1Q96PB1 AL355075.4-201ENST00000554988 638 ntBASIC21.73■■□□□ 1.07
CASD1Q96PB1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.73■■□□□ 1.07
CASD1Q96PB1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CASD1Q96PB1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CASD1Q96PB1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CASD1Q96PB1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
CASD1Q96PB1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CASD1Q96PB1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CASD1Q96PB1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CASD1Q96PB1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CASD1Q96PB1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CASD1Q96PB1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CASD1Q96PB1 AL049796.1-201ENST00000565336 1766 ntBASIC21.72■■□□□ 1.07
CASD1Q96PB1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CASD1Q96PB1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CASD1Q96PB1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CASD1Q96PB1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CASD1Q96PB1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CASD1Q96PB1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.72■■□□□ 1.07
CASD1Q96PB1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.72■■□□□ 1.07
CASD1Q96PB1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CASD1Q96PB1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CASD1Q96PB1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CASD1Q96PB1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.72■■□□□ 1.07
CASD1Q96PB1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CASD1Q96PB1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.72■■□□□ 1.07
CASD1Q96PB1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.72■■□□□ 1.07
CASD1Q96PB1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms