Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.81■□□□□ 0.92
C9orf72Q96LT7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.81■□□□□ 0.92
C9orf72Q96LT7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C9orf72Q96LT7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.81■□□□□ 0.92
C9orf72Q96LT7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C9orf72Q96LT7 AC087289.5-201ENST00000586076 3175 ntBASIC20.81■□□□□ 0.92
C9orf72Q96LT7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C9orf72Q96LT7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.81■□□□□ 0.92
C9orf72Q96LT7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C9orf72Q96LT7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
C9orf72Q96LT7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf72Q96LT7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 SMG8-203ENST00000578922 2178 ntBASIC20.79■□□□□ 0.92
C9orf72Q96LT7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 AC079140.4-201ENST00000507448 529 ntBASIC20.79■□□□□ 0.92
C9orf72Q96LT7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 AC008175.2-201ENST00000612840 297 ntBASIC20.79■□□□□ 0.92
C9orf72Q96LT7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
C9orf72Q96LT7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 POU5F1P4-201ENST00000413175 1085 ntBASIC20.78■□□□□ 0.92
C9orf72Q96LT7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 AC137761.2-201ENST00000561729 223 ntBASIC20.78■□□□□ 0.92
C9orf72Q96LT7 AC145350.3-201ENST00000569033 163 ntBASIC20.78■□□□□ 0.92
C9orf72Q96LT7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C9orf72Q96LT7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
C9orf72Q96LT7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.77■□□□□ 0.92
C9orf72Q96LT7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
C9orf72Q96LT7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
C9orf72Q96LT7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.77■□□□□ 0.92
C9orf72Q96LT7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
C9orf72Q96LT7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
C9orf72Q96LT7 KRT19P1-201ENST00000405746 1186 ntBASIC20.77■□□□□ 0.92
C9orf72Q96LT7 AC016769.1-201ENST00000409132 1010 ntBASIC20.77■□□□□ 0.92
C9orf72Q96LT7 AC006015.1-201ENST00000429970 570 ntBASIC20.77■□□□□ 0.92
C9orf72Q96LT7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.77■□□□□ 0.92
C9orf72Q96LT7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.77■□□□□ 0.92
C9orf72Q96LT7 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.77■□□□□ 0.92
C9orf72Q96LT7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
C9orf72Q96LT7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
C9orf72Q96LT7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
C9orf72Q96LT7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
C9orf72Q96LT7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
C9orf72Q96LT7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C9orf72Q96LT7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
C9orf72Q96LT7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms