Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.92■■□□□ 1.1
SNX27Q96L92 AC128676.1-201ENST00000454392 318 ntBASIC21.92■■□□□ 1.1
SNX27Q96L92 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNX27Q96L92 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.92■■□□□ 1.1
SNX27Q96L92 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNX27Q96L92 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNX27Q96L92 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.92■■□□□ 1.1
SNX27Q96L92 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SNX27Q96L92 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SNX27Q96L92 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SNX27Q96L92 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.92■■□□□ 1.1
SNX27Q96L92 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
SNX27Q96L92 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.91■■□□□ 1.1
SNX27Q96L92 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNX27Q96L92 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNX27Q96L92 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SNX27Q96L92 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNX27Q96L92 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.91■■□□□ 1.1
SNX27Q96L92 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.91■■□□□ 1.1
SNX27Q96L92 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNX27Q96L92 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SNX27Q96L92 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.91■■□□□ 1.1
SNX27Q96L92 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.91■■□□□ 1.1
SNX27Q96L92 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.91■■□□□ 1.1
SNX27Q96L92 AC005829.2-201ENST00000571422 1056 ntBASIC21.91■■□□□ 1.1
SNX27Q96L92 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNX27Q96L92 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SNX27Q96L92 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.91■■□□□ 1.1
SNX27Q96L92 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SNX27Q96L92 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SNX27Q96L92 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.9■■□□□ 1.1
SNX27Q96L92 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNX27Q96L92 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNX27Q96L92 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
SNX27Q96L92 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SNX27Q96L92 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SNX27Q96L92 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNX27Q96L92 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNX27Q96L92 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.9■■□□□ 1.1
SNX27Q96L92 AC073648.6-201ENST00000641589 218 ntBASIC21.9■■□□□ 1.1
SNX27Q96L92 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.9■■□□□ 1.1
SNX27Q96L92 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNX27Q96L92 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNX27Q96L92 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.9■■□□□ 1.1
SNX27Q96L92 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.9■■□□□ 1.1
SNX27Q96L92 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
SNX27Q96L92 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SNX27Q96L92 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SNX27Q96L92 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SNX27Q96L92 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX27Q96L92 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX27Q96L92 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX27Q96L92 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.89■■□□□ 1.09
SNX27Q96L92 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX27Q96L92 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX27Q96L92 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.89■■□□□ 1.09
SNX27Q96L92 LINC01023-201ENST00000606054 436 ntBASIC21.89■■□□□ 1.09
SNX27Q96L92 FP700111.2-201ENST00000619190 1892 ntBASIC21.89■■□□□ 1.09
SNX27Q96L92 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.89■■□□□ 1.09
SNX27Q96L92 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX27Q96L92 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX27Q96L92 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.89■■□□□ 1.09
SNX27Q96L92 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.89■■□□□ 1.09
SNX27Q96L92 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX27Q96L92 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX27Q96L92 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.89■■□□□ 1.09
SNX27Q96L92 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SNX27Q96L92 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SNX27Q96L92 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNX27Q96L92 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNX27Q96L92 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNX27Q96L92 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNX27Q96L92 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SNX27Q96L92 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.88■■□□□ 1.09
SNX27Q96L92 AL158047.1-201ENST00000445918 881 ntBASIC21.88■■□□□ 1.09
SNX27Q96L92 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.88■■□□□ 1.09
SNX27Q96L92 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SNX27Q96L92 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.88■■□□□ 1.09
SNX27Q96L92 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.88■■□□□ 1.09
SNX27Q96L92 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
SNX27Q96L92 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SNX27Q96L92 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNX27Q96L92 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNX27Q96L92 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.88■■□□□ 1.09
SNX27Q96L92 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
SNX27Q96L92 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNX27Q96L92 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SNX27Q96L92 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.88■■□□□ 1.09
SNX27Q96L92 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNX27Q96L92 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNX27Q96L92 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SNX27Q96L92 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.87■■□□□ 1.09
SNX27Q96L92 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.87■■□□□ 1.09
SNX27Q96L92 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SNX27Q96L92 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.87■■□□□ 1.09
SNX27Q96L92 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SNX27Q96L92 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.87■■□□□ 1.09
SNX27Q96L92 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SNX27Q96L92 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.87■■□□□ 1.09
SNX27Q96L92 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms