Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPG11Q96JI7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPG11Q96JI7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPG11Q96JI7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.26■□□□□ 0.35
SPG11Q96JI7 AL121894.2-201ENST00000602977 491 ntBASIC17.26■□□□□ 0.35
SPG11Q96JI7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.26■□□□□ 0.35
SPG11Q96JI7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.26■□□□□ 0.35
SPG11Q96JI7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.26■□□□□ 0.35
SPG11Q96JI7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SPG11Q96JI7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
SPG11Q96JI7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPG11Q96JI7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.25■□□□□ 0.35
SPG11Q96JI7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SPG11Q96JI7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPG11Q96JI7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SPG11Q96JI7 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.25■□□□□ 0.35
SPG11Q96JI7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.25■□□□□ 0.35
SPG11Q96JI7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.25■□□□□ 0.35
SPG11Q96JI7 FITM1-202ENST00000559294 800 ntBASIC17.25■□□□□ 0.35
SPG11Q96JI7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.25■□□□□ 0.35
SPG11Q96JI7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.25■□□□□ 0.35
SPG11Q96JI7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPG11Q96JI7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPG11Q96JI7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SPG11Q96JI7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPG11Q96JI7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SPG11Q96JI7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.25■□□□□ 0.35
SPG11Q96JI7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.25■□□□□ 0.35
SPG11Q96JI7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.25■□□□□ 0.35
SPG11Q96JI7 AL356652.1-201ENST00000615962 565 ntBASIC17.25■□□□□ 0.35
SPG11Q96JI7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.24■□□□□ 0.35
SPG11Q96JI7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPG11Q96JI7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPG11Q96JI7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
SPG11Q96JI7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.24■□□□□ 0.35
SPG11Q96JI7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.24■□□□□ 0.35
SPG11Q96JI7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPG11Q96JI7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPG11Q96JI7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SPG11Q96JI7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
SPG11Q96JI7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SPG11Q96JI7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SPG11Q96JI7 AL121829.2-201ENST00000620908 328 ntBASIC17.24■□□□□ 0.35
SPG11Q96JI7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPG11Q96JI7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SPG11Q96JI7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPG11Q96JI7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.24■□□□□ 0.35
SPG11Q96JI7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.24■□□□□ 0.35
SPG11Q96JI7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPG11Q96JI7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPG11Q96JI7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPG11Q96JI7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SPG11Q96JI7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPG11Q96JI7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPG11Q96JI7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.23■□□□□ 0.35
SPG11Q96JI7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPG11Q96JI7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPG11Q96JI7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPG11Q96JI7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPG11Q96JI7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.23■□□□□ 0.35
SPG11Q96JI7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SPG11Q96JI7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SPG11Q96JI7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPG11Q96JI7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SPG11Q96JI7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.23■□□□□ 0.35
SPG11Q96JI7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.23■□□□□ 0.35
SPG11Q96JI7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPG11Q96JI7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.23■□□□□ 0.35
SPG11Q96JI7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPG11Q96JI7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.23■□□□□ 0.35
SPG11Q96JI7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPG11Q96JI7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPG11Q96JI7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.23■□□□□ 0.35
SPG11Q96JI7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SPG11Q96JI7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.22■□□□□ 0.35
SPG11Q96JI7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.22■□□□□ 0.35
SPG11Q96JI7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.22■□□□□ 0.35
SPG11Q96JI7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SPG11Q96JI7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPG11Q96JI7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPG11Q96JI7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.22■□□□□ 0.35
SPG11Q96JI7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.22■□□□□ 0.35
SPG11Q96JI7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPG11Q96JI7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPG11Q96JI7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPG11Q96JI7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPG11Q96JI7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.22■□□□□ 0.35
SPG11Q96JI7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SPG11Q96JI7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.22■□□□□ 0.35
SPG11Q96JI7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.22■□□□□ 0.35
SPG11Q96JI7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPG11Q96JI7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPG11Q96JI7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPG11Q96JI7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.22■□□□□ 0.35
SPG11Q96JI7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SPG11Q96JI7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.22■□□□□ 0.35
SPG11Q96JI7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SPG11Q96JI7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPG11Q96JI7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPG11Q96JI7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms