Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM11Q96F44 SMG8-203ENST00000578922 2178 ntBASIC21.43■■□□□ 1.02
TRIM11Q96F44 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM11Q96F44 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM11Q96F44 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM11Q96F44 AC026271.2-201ENST00000428091 497 ntBASIC21.42■■□□□ 1.02
TRIM11Q96F44 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM11Q96F44 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.42■■□□□ 1.02
TRIM11Q96F44 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.42■■□□□ 1.02
TRIM11Q96F44 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM11Q96F44 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.42■■□□□ 1.02
TRIM11Q96F44 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.42■■□□□ 1.02
TRIM11Q96F44 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM11Q96F44 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.42■■□□□ 1.02
TRIM11Q96F44 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM11Q96F44 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM11Q96F44 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM11Q96F44 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM11Q96F44 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM11Q96F44 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIM11Q96F44 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.41■■□□□ 1.02
TRIM11Q96F44 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM11Q96F44 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
TRIM11Q96F44 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM11Q96F44 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIM11Q96F44 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM11Q96F44 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM11Q96F44 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
TRIM11Q96F44 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM11Q96F44 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.41■■□□□ 1.02
TRIM11Q96F44 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM11Q96F44 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM11Q96F44 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM11Q96F44 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM11Q96F44 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM11Q96F44 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.41■■□□□ 1.02
TRIM11Q96F44 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.4■■□□□ 1.02
TRIM11Q96F44 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.4■■□□□ 1.02
TRIM11Q96F44 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM11Q96F44 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TRIM11Q96F44 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM11Q96F44 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
TRIM11Q96F44 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.4■■□□□ 1.02
TRIM11Q96F44 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM11Q96F44 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM11Q96F44 AC016405.3-201ENST00000607710 860 ntBASIC21.4■■□□□ 1.02
TRIM11Q96F44 AC100791.3-201ENST00000617619 330 ntBASIC21.4■■□□□ 1.02
TRIM11Q96F44 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TRIM11Q96F44 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.4■■□□□ 1.02
TRIM11Q96F44 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TRIM11Q96F44 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TRIM11Q96F44 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM11Q96F44 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM11Q96F44 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
TRIM11Q96F44 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
TRIM11Q96F44 TCF3P1-201ENST00000423021 1937 ntBASIC21.39■■□□□ 1.02
TRIM11Q96F44 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRIM11Q96F44 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
TRIM11Q96F44 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
TRIM11Q96F44 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
TRIM11Q96F44 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM11Q96F44 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM11Q96F44 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM11Q96F44 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM11Q96F44 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TRIM11Q96F44 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM11Q96F44 AL391422.3-201ENST00000603791 2761 ntBASIC21.39■■□□□ 1.01
TRIM11Q96F44 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
TRIM11Q96F44 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM11Q96F44 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.39■■□□□ 1.01
TRIM11Q96F44 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
TRIM11Q96F44 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM11Q96F44 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM11Q96F44 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM11Q96F44 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
TRIM11Q96F44 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM11Q96F44 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
TRIM11Q96F44 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM11Q96F44 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM11Q96F44 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM11Q96F44 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM11Q96F44 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM11Q96F44 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
TRIM11Q96F44 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM11Q96F44 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM11Q96F44 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM11Q96F44 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM11Q96F44 AC006015.1-201ENST00000429970 570 ntBASIC21.38■■□□□ 1.01
TRIM11Q96F44 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.38■■□□□ 1.01
TRIM11Q96F44 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM11Q96F44 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM11Q96F44 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM11Q96F44 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM11Q96F44 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM11Q96F44 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.38■■□□□ 1.01
TRIM11Q96F44 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM11Q96F44 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM11Q96F44 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.38■■□□□ 1.01
TRIM11Q96F44 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM11Q96F44 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms