Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLIP3Q96DZ5 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
CLIP3Q96DZ5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLIP3Q96DZ5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.48■□□□□ 0.71
CLIP3Q96DZ5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLIP3Q96DZ5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLIP3Q96DZ5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLIP3Q96DZ5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.48■□□□□ 0.71
CLIP3Q96DZ5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.48■□□□□ 0.71
CLIP3Q96DZ5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.48■□□□□ 0.71
CLIP3Q96DZ5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.48■□□□□ 0.71
CLIP3Q96DZ5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLIP3Q96DZ5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.48■□□□□ 0.71
CLIP3Q96DZ5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLIP3Q96DZ5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLIP3Q96DZ5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLIP3Q96DZ5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP3Q96DZ5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 UNC93B5-201ENST00000530315 699 ntBASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 AC105020.6-201ENST00000621523 1217 ntBASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.46■□□□□ 0.71
CLIP3Q96DZ5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 AC060766.5-201ENST00000590539 871 ntBASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 AC006058.3-201ENST00000606217 1069 ntBASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CLIP3Q96DZ5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms