Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.85■□□□□ 0.93
HDAC11Q96DB2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
HDAC11Q96DB2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC11Q96DB2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.85■□□□□ 0.93
HDAC11Q96DB2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC11Q96DB2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.85■□□□□ 0.93
HDAC11Q96DB2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
HDAC11Q96DB2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
HDAC11Q96DB2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC11Q96DB2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC11Q96DB2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HDAC11Q96DB2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC11Q96DB2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC11Q96DB2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC11Q96DB2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC11Q96DB2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC11Q96DB2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC11Q96DB2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.84■□□□□ 0.93
HDAC11Q96DB2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC11Q96DB2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC11Q96DB2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.84■□□□□ 0.93
HDAC11Q96DB2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.84■□□□□ 0.93
HDAC11Q96DB2 AL356652.1-201ENST00000615962 565 ntBASIC20.84■□□□□ 0.93
HDAC11Q96DB2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.84■□□□□ 0.93
HDAC11Q96DB2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC11Q96DB2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC11Q96DB2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.84■□□□□ 0.93
HDAC11Q96DB2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.84■□□□□ 0.93
HDAC11Q96DB2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC11Q96DB2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC11Q96DB2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.84■□□□□ 0.93
HDAC11Q96DB2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC11Q96DB2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC11Q96DB2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC11Q96DB2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.83■□□□□ 0.93
HDAC11Q96DB2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC11Q96DB2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.83■□□□□ 0.93
HDAC11Q96DB2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HDAC11Q96DB2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC11Q96DB2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC11Q96DB2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC11Q96DB2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC11Q96DB2 MCRIP2P1-201ENST00000394346 511 ntBASIC20.83■□□□□ 0.93
HDAC11Q96DB2 CDCA4P2-201ENST00000441182 718 ntBASIC20.83■□□□□ 0.93
HDAC11Q96DB2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.83■□□□□ 0.93
HDAC11Q96DB2 AC092666.2-201ENST00000613287 246 ntBASIC20.83■□□□□ 0.93
HDAC11Q96DB2 OR10C1-204ENST00000622521 1039 ntBASIC20.83■□□□□ 0.93
HDAC11Q96DB2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC11Q96DB2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HDAC11Q96DB2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HDAC11Q96DB2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 AC005181.1-201ENST00000604782 1256 ntBASIC20.82■□□□□ 0.92
HDAC11Q96DB2 RAP2CP1-201ENST00000605103 478 ntBASIC20.82■□□□□ 0.92
HDAC11Q96DB2 AC008694.1-202ENST00000636953 945 ntBASIC20.82■□□□□ 0.92
HDAC11Q96DB2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC11Q96DB2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 AL162377.1-201ENST00000618844 1793 ntBASIC20.81■□□□□ 0.92
HDAC11Q96DB2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC11Q96DB2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.8■□□□□ 0.92
HDAC11Q96DB2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.8■□□□□ 0.92
HDAC11Q96DB2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.8■□□□□ 0.92
HDAC11Q96DB2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC11Q96DB2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC11Q96DB2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC11Q96DB2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms