Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
NCLNQ969V3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.59■□□□□ 0.73
NCLNQ969V3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.59■□□□□ 0.73
NCLNQ969V3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.59■□□□□ 0.73
NCLNQ969V3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NCLNQ969V3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.59■□□□□ 0.73
NCLNQ969V3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NCLNQ969V3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NCLNQ969V3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.58■□□□□ 0.73
NCLNQ969V3 AC061975.6-201ENST00000579045 1553 ntBASIC19.58■□□□□ 0.73
NCLNQ969V3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NCLNQ969V3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NCLNQ969V3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
NCLNQ969V3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NCLNQ969V3 AC027702.1-201ENST00000563810 1770 ntBASIC19.58■□□□□ 0.73
NCLNQ969V3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.58■□□□□ 0.73
NCLNQ969V3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NCLNQ969V3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.58■□□□□ 0.72
NCLNQ969V3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NCLNQ969V3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
NCLNQ969V3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
NCLNQ969V3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NCLNQ969V3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NCLNQ969V3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NCLNQ969V3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NCLNQ969V3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.58■□□□□ 0.72
NCLNQ969V3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.58■□□□□ 0.72
NCLNQ969V3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NCLNQ969V3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NCLNQ969V3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NCLNQ969V3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLNQ969V3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLNQ969V3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLNQ969V3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLNQ969V3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLNQ969V3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.57■□□□□ 0.72
NCLNQ969V3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NCLNQ969V3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.57■□□□□ 0.72
NCLNQ969V3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NCLNQ969V3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.57■□□□□ 0.72
NCLNQ969V3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NCLNQ969V3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NCLNQ969V3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.57■□□□□ 0.72
NCLNQ969V3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLNQ969V3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLNQ969V3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
NCLNQ969V3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLNQ969V3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.57■□□□□ 0.72
NCLNQ969V3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLNQ969V3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NCLNQ969V3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.56■□□□□ 0.72
NCLNQ969V3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.56■□□□□ 0.72
NCLNQ969V3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NCLNQ969V3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLNQ969V3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NCLNQ969V3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLNQ969V3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.56■□□□□ 0.72
NCLNQ969V3 AC090192.1-201ENST00000517740 490 ntBASIC19.56■□□□□ 0.72
NCLNQ969V3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.56■□□□□ 0.72
NCLNQ969V3 AC073111.5-205ENST00000641717 521 ntBASIC19.56■□□□□ 0.72
NCLNQ969V3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NCLNQ969V3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLNQ969V3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
NCLNQ969V3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLNQ969V3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.56■□□□□ 0.72
NCLNQ969V3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
NCLNQ969V3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NCLNQ969V3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NCLNQ969V3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
NCLNQ969V3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NCLNQ969V3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.56■□□□□ 0.72
NCLNQ969V3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLNQ969V3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.56■□□□□ 0.72
NCLNQ969V3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
NCLNQ969V3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLNQ969V3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.55■□□□□ 0.72
NCLNQ969V3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.55■□□□□ 0.72
NCLNQ969V3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLNQ969V3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLNQ969V3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLNQ969V3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.55■□□□□ 0.72
NCLNQ969V3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NCLNQ969V3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
NCLNQ969V3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLNQ969V3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLNQ969V3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLNQ969V3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.55■□□□□ 0.72
NCLNQ969V3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NCLNQ969V3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.55■□□□□ 0.72
NCLNQ969V3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.55■□□□□ 0.72
NCLNQ969V3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLNQ969V3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.55■□□□□ 0.72
NCLNQ969V3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLNQ969V3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
NCLNQ969V3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLNQ969V3 AC007225.1-201ENST00000566331 1836 ntBASIC19.55■□□□□ 0.72
NCLNQ969V3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLNQ969V3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NCLNQ969V3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NCLNQ969V3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms