Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.12■■□□□ 1.29
TNFRSF25Q93038 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TNFRSF25Q93038 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TNFRSF25Q93038 GPX1P1-201ENST00000388829 606 ntBASIC23.12■■□□□ 1.29
TNFRSF25Q93038 BX276092.2-201ENST00000417668 665 ntBASIC23.12■■□□□ 1.29
TNFRSF25Q93038 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
TNFRSF25Q93038 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
TNFRSF25Q93038 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TNFRSF25Q93038 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TNFRSF25Q93038 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
TNFRSF25Q93038 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.12■■□□□ 1.29
TNFRSF25Q93038 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
TNFRSF25Q93038 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TNFRSF25Q93038 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
TNFRSF25Q93038 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.1■■□□□ 1.29
TNFRSF25Q93038 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TNFRSF25Q93038 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TNFRSF25Q93038 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TNFRSF25Q93038 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
TNFRSF25Q93038 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.1■■□□□ 1.29
TNFRSF25Q93038 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
TNFRSF25Q93038 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
TNFRSF25Q93038 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.1■■□□□ 1.29
TNFRSF25Q93038 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.1■■□□□ 1.29
TNFRSF25Q93038 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
TNFRSF25Q93038 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TNFRSF25Q93038 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TNFRSF25Q93038 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TNFRSF25Q93038 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.09■■□□□ 1.29
TNFRSF25Q93038 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TNFRSF25Q93038 C2orf69P4-201ENST00000565394 541 ntBASIC23.09■■□□□ 1.29
TNFRSF25Q93038 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
TNFRSF25Q93038 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.09■■□□□ 1.29
TNFRSF25Q93038 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.09■■□□□ 1.29
TNFRSF25Q93038 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TNFRSF25Q93038 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TNFRSF25Q93038 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.09■■□□□ 1.29
TNFRSF25Q93038 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TNFRSF25Q93038 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TNFRSF25Q93038 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TNFRSF25Q93038 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.29
TNFRSF25Q93038 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TNFRSF25Q93038 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TNFRSF25Q93038 AC092118.2-201ENST00000613495 667 ntBASIC23.08■■□□□ 1.29
TNFRSF25Q93038 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TNFRSF25Q93038 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TNFRSF25Q93038 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TNFRSF25Q93038 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
TNFRSF25Q93038 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TNFRSF25Q93038 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TNFRSF25Q93038 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
TNFRSF25Q93038 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
TNFRSF25Q93038 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TNFRSF25Q93038 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.07■■□□□ 1.28
TNFRSF25Q93038 LSM12P1-201ENST00000411836 588 ntBASIC23.07■■□□□ 1.28
TNFRSF25Q93038 AC098934.4-201ENST00000564127 592 ntBASIC23.07■■□□□ 1.28
TNFRSF25Q93038 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.07■■□□□ 1.28
TNFRSF25Q93038 AC104771.1-201ENST00000603335 964 ntBASIC23.07■■□□□ 1.28
TNFRSF25Q93038 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
TNFRSF25Q93038 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.07■■□□□ 1.28
TNFRSF25Q93038 AL391422.3-201ENST00000603791 2761 ntBASIC23.07■■□□□ 1.28
TNFRSF25Q93038 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.07■■□□□ 1.28
TNFRSF25Q93038 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.07■■□□□ 1.28
TNFRSF25Q93038 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
TNFRSF25Q93038 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TNFRSF25Q93038 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
TNFRSF25Q93038 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TNFRSF25Q93038 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.07■■□□□ 1.28
TNFRSF25Q93038 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.06■■□□□ 1.28
TNFRSF25Q93038 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TNFRSF25Q93038 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.06■■□□□ 1.28
TNFRSF25Q93038 AL138781.1-201ENST00000566567 1274 ntBASIC23.06■■□□□ 1.28
TNFRSF25Q93038 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TNFRSF25Q93038 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TNFRSF25Q93038 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TNFRSF25Q93038 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
TNFRSF25Q93038 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
TNFRSF25Q93038 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.05■■□□□ 1.28
TNFRSF25Q93038 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.05■■□□□ 1.28
TNFRSF25Q93038 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms