Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25.11■■□□□ 1.61
RPGRQ92834 AC233723.2-201ENST00000623798 2106 ntBASIC25.11■■□□□ 1.61
RPGRQ92834 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RPGRQ92834 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RPGRQ92834 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
RPGRQ92834 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.1■■□□□ 1.61
RPGRQ92834 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.1■■□□□ 1.61
RPGRQ92834 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RPGRQ92834 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RPGRQ92834 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RPGRQ92834 NBPF21P-201ENST00000425093 1451 ntBASIC25.1■■□□□ 1.61
RPGRQ92834 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
RPGRQ92834 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
RPGRQ92834 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC25.1■■□□□ 1.61
RPGRQ92834 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
RPGRQ92834 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RPGRQ92834 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.1■■□□□ 1.61
RPGRQ92834 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.1■■□□□ 1.61
RPGRQ92834 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC25.1■■□□□ 1.61
RPGRQ92834 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RPGRQ92834 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RPGRQ92834 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RPGRQ92834 CD177P1-201ENST00000606252 935 ntBASIC25.1■■□□□ 1.61
RPGRQ92834 AL353708.3-201ENST00000610272 989 ntBASIC25.1■■□□□ 1.61
RPGRQ92834 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RPGRQ92834 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC25.1■■□□□ 1.61
RPGRQ92834 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
RPGRQ92834 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC25.09■■□□□ 1.61
RPGRQ92834 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RPGRQ92834 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RPGRQ92834 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
RPGRQ92834 AL353807.1-201ENST00000427475 662 ntBASIC25.09■■□□□ 1.61
RPGRQ92834 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RPGRQ92834 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
RPGRQ92834 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RPGRQ92834 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RPGRQ92834 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RPGRQ92834 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
RPGRQ92834 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RPGRQ92834 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC25.08■■□□□ 1.61
RPGRQ92834 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RPGRQ92834 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RPGRQ92834 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RPGRQ92834 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
RPGRQ92834 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC25.08■■□□□ 1.61
RPGRQ92834 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.08■■□□□ 1.61
RPGRQ92834 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.08■■□□□ 1.61
RPGRQ92834 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC25.08■■□□□ 1.61
RPGRQ92834 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RPGRQ92834 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC25.08■■□□□ 1.61
RPGRQ92834 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
RPGRQ92834 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.6
RPGRQ92834 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
RPGRQ92834 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC25.08■■□□□ 1.6
RPGRQ92834 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RPGRQ92834 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.07■■□□□ 1.6
RPGRQ92834 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.07■■□□□ 1.6
RPGRQ92834 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RPGRQ92834 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
RPGRQ92834 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
RPGRQ92834 FAM197Y1-201ENST00000421178 764 ntBASIC25.07■■□□□ 1.6
RPGRQ92834 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RPGRQ92834 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
RPGRQ92834 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC25.07■■□□□ 1.6
RPGRQ92834 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
RPGRQ92834 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RPGRQ92834 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC25.07■■□□□ 1.6
RPGRQ92834 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC25.07■■□□□ 1.6
RPGRQ92834 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RPGRQ92834 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.07■■□□□ 1.6
RPGRQ92834 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC25.07■■□□□ 1.6
RPGRQ92834 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RPGRQ92834 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RPGRQ92834 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.06■■□□□ 1.6
RPGRQ92834 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RPGRQ92834 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RPGRQ92834 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC25.06■■□□□ 1.6
RPGRQ92834 MMP23A-201ENST00000234610 1017 ntBASIC25.06■■□□□ 1.6
RPGRQ92834 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RPGRQ92834 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
RPGRQ92834 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RPGRQ92834 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.06■■□□□ 1.6
RPGRQ92834 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.06■■□□□ 1.6
RPGRQ92834 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
RPGRQ92834 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC25.06■■□□□ 1.6
RPGRQ92834 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RPGRQ92834 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.05■■□□□ 1.6
RPGRQ92834 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RPGRQ92834 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
RPGRQ92834 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RPGRQ92834 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RPGRQ92834 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RPGRQ92834 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RPGRQ92834 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RPGRQ92834 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RPGRQ92834 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RPGRQ92834 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RPGRQ92834 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC25.05■■□□□ 1.6
RPGRQ92834 F2R-202ENST00000505600 442 ntTSL 2 BASIC25.05■■□□□ 1.6
RPGRQ92834 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms