Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
TRIM41Q8WV44 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC34.82■■■■□ 3.16
TRIM41Q8WV44 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC34.82■■■■□ 3.16
TRIM41Q8WV44 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
TRIM41Q8WV44 MCRIP2P1-201ENST00000394346 511 ntBASIC34.82■■■■□ 3.16
TRIM41Q8WV44 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC34.82■■■■□ 3.16
TRIM41Q8WV44 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC34.82■■■■□ 3.16
TRIM41Q8WV44 AC060766.5-201ENST00000590539 871 ntBASIC34.82■■■■□ 3.16
TRIM41Q8WV44 AP001412.1-201ENST00000608405 714 ntBASIC34.82■■■■□ 3.16
TRIM41Q8WV44 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC34.82■■■■□ 3.16
TRIM41Q8WV44 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
TRIM41Q8WV44 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
TRIM41Q8WV44 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC34.81■■■■□ 3.16
TRIM41Q8WV44 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC34.81■■■■□ 3.16
TRIM41Q8WV44 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC34.81■■■■□ 3.16
TRIM41Q8WV44 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC34.81■■■■□ 3.16
TRIM41Q8WV44 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
TRIM41Q8WV44 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
TRIM41Q8WV44 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC34.81■■■■□ 3.16
TRIM41Q8WV44 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
TRIM41Q8WV44 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC34.81■■■■□ 3.16
TRIM41Q8WV44 CYP21A1P-202ENST00000354927 1481 ntBASIC34.81■■■■□ 3.16
TRIM41Q8WV44 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC34.81■■■■□ 3.16
TRIM41Q8WV44 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
TRIM41Q8WV44 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC34.81■■■■□ 3.16
TRIM41Q8WV44 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
TRIM41Q8WV44 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC34.81■■■■□ 3.16
TRIM41Q8WV44 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
TRIM41Q8WV44 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
TRIM41Q8WV44 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
TRIM41Q8WV44 AC069544.1-201ENST00000609399 999 ntBASIC34.8■■■■□ 3.16
TRIM41Q8WV44 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
TRIM41Q8WV44 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC34.8■■■■□ 3.16
TRIM41Q8WV44 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC34.8■■■■□ 3.16
TRIM41Q8WV44 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
TRIM41Q8WV44 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
TRIM41Q8WV44 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC34.79■■■■□ 3.16
TRIM41Q8WV44 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
TRIM41Q8WV44 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC34.79■■■■□ 3.16
TRIM41Q8WV44 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC34.79■■■■□ 3.16
TRIM41Q8WV44 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC34.79■■■■□ 3.16
TRIM41Q8WV44 AC113410.3-201ENST00000623366 203 ntBASIC34.79■■■■□ 3.16
TRIM41Q8WV44 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC34.79■■■■□ 3.16
TRIM41Q8WV44 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
TRIM41Q8WV44 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
TRIM41Q8WV44 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
TRIM41Q8WV44 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
TRIM41Q8WV44 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC34.79■■■■□ 3.16
TRIM41Q8WV44 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
TRIM41Q8WV44 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC34.78■■■■□ 3.16
TRIM41Q8WV44 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
TRIM41Q8WV44 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC34.78■■■■□ 3.16
TRIM41Q8WV44 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
TRIM41Q8WV44 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
TRIM41Q8WV44 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
TRIM41Q8WV44 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC34.78■■■■□ 3.16
TRIM41Q8WV44 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
TRIM41Q8WV44 FEM1AP4-201ENST00000443167 1987 ntBASIC34.78■■■■□ 3.16
TRIM41Q8WV44 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC34.78■■■■□ 3.16
TRIM41Q8WV44 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC34.78■■■■□ 3.16
TRIM41Q8WV44 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
TRIM41Q8WV44 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC34.77■■■■□ 3.16
TRIM41Q8WV44 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
TRIM41Q8WV44 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
TRIM41Q8WV44 LSM12P1-201ENST00000411836 588 ntBASIC34.77■■■■□ 3.16
TRIM41Q8WV44 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
TRIM41Q8WV44 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC34.77■■■■□ 3.16
TRIM41Q8WV44 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC34.77■■■■□ 3.16
TRIM41Q8WV44 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC34.77■■■■□ 3.16
TRIM41Q8WV44 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
TRIM41Q8WV44 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC34.77■■■■□ 3.16
TRIM41Q8WV44 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC34.77■■■■□ 3.16
TRIM41Q8WV44 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC34.77■■■■□ 3.16
TRIM41Q8WV44 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC34.76■■■■□ 3.16
TRIM41Q8WV44 GCK-205ENST00000437084 1385 ntTSL 5 BASIC34.76■■■■□ 3.16
TRIM41Q8WV44 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
TRIM41Q8WV44 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC34.76■■■■□ 3.16
TRIM41Q8WV44 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
TRIM41Q8WV44 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC34.76■■■■□ 3.16
TRIM41Q8WV44 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC34.76■■■■□ 3.16
TRIM41Q8WV44 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC34.76■■■■□ 3.16
TRIM41Q8WV44 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
TRIM41Q8WV44 MIR6786-201ENST00000616843 113 ntBASIC34.76■■■■□ 3.16
TRIM41Q8WV44 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC34.76■■■■□ 3.15
TRIM41Q8WV44 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
TRIM41Q8WV44 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC34.76■■■■□ 3.15
TRIM41Q8WV44 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC34.76■■■■□ 3.15
TRIM41Q8WV44 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
TRIM41Q8WV44 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC34.75■■■■□ 3.15
TRIM41Q8WV44 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
TRIM41Q8WV44 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC34.75■■■■□ 3.15
TRIM41Q8WV44 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC34.75■■■■□ 3.15
TRIM41Q8WV44 AL049796.1-201ENST00000565336 1766 ntBASIC34.75■■■■□ 3.15
TRIM41Q8WV44 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC34.75■■■■□ 3.15
TRIM41Q8WV44 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC34.75■■■■□ 3.15
TRIM41Q8WV44 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC34.75■■■■□ 3.15
TRIM41Q8WV44 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC34.75■■■■□ 3.15
TRIM41Q8WV44 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC34.75■■■■□ 3.15
TRIM41Q8WV44 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC34.75■■■■□ 3.15
TRIM41Q8WV44 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms