Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC24.86■■□□□ 1.57
SNED1Q8TER0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SNED1Q8TER0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SNED1Q8TER0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SNED1Q8TER0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SNED1Q8TER0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SNED1Q8TER0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC24.86■■□□□ 1.57
SNED1Q8TER0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SNED1Q8TER0 F2R-202ENST00000505600 442 ntTSL 2 BASIC24.86■■□□□ 1.57
SNED1Q8TER0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SNED1Q8TER0 AC023632.3-201ENST00000521633 145 ntBASIC24.86■■□□□ 1.57
SNED1Q8TER0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SNED1Q8TER0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC24.86■■□□□ 1.57
SNED1Q8TER0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SNED1Q8TER0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC24.85■■□□□ 1.57
SNED1Q8TER0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SNED1Q8TER0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.85■■□□□ 1.57
SNED1Q8TER0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SNED1Q8TER0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
SNED1Q8TER0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC24.85■■□□□ 1.57
SNED1Q8TER0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
SNED1Q8TER0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC24.85■■□□□ 1.57
SNED1Q8TER0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
SNED1Q8TER0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SNED1Q8TER0 AL355355.2-201ENST00000442321 338 ntBASIC24.85■■□□□ 1.57
SNED1Q8TER0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC24.85■■□□□ 1.57
SNED1Q8TER0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC24.85■■□□□ 1.57
SNED1Q8TER0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC24.85■■□□□ 1.57
SNED1Q8TER0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SNED1Q8TER0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
SNED1Q8TER0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SNED1Q8TER0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SNED1Q8TER0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC24.84■■□□□ 1.57
SNED1Q8TER0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SNED1Q8TER0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC24.84■■□□□ 1.57
SNED1Q8TER0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SNED1Q8TER0 AC113347.1-201ENST00000413321 391 ntBASIC24.84■■□□□ 1.57
SNED1Q8TER0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC24.84■■□□□ 1.57
SNED1Q8TER0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC24.84■■□□□ 1.57
SNED1Q8TER0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC24.84■■□□□ 1.57
SNED1Q8TER0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SNED1Q8TER0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC24.84■■□□□ 1.57
SNED1Q8TER0 NBPF21P-201ENST00000425093 1451 ntBASIC24.83■■□□□ 1.57
SNED1Q8TER0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SNED1Q8TER0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
SNED1Q8TER0 AC073508.3-201ENST00000619697 1419 ntBASIC24.83■■□□□ 1.57
SNED1Q8TER0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
SNED1Q8TER0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
SNED1Q8TER0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC24.83■■□□□ 1.57
SNED1Q8TER0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SNED1Q8TER0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC24.83■■□□□ 1.57
SNED1Q8TER0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SNED1Q8TER0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC24.83■■□□□ 1.57
SNED1Q8TER0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC24.83■■□□□ 1.57
SNED1Q8TER0 AP000525.1-201ENST00000608286 694 ntBASIC24.83■■□□□ 1.57
SNED1Q8TER0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SNED1Q8TER0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.83■■□□□ 1.56
SNED1Q8TER0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SNED1Q8TER0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SNED1Q8TER0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC24.82■■□□□ 1.56
SNED1Q8TER0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
SNED1Q8TER0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SNED1Q8TER0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SNED1Q8TER0 AC005521.1-201ENST00000393351 872 ntBASIC24.82■■□□□ 1.56
SNED1Q8TER0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC24.82■■□□□ 1.56
SNED1Q8TER0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC24.82■■□□□ 1.56
SNED1Q8TER0 AC073195.1-201ENST00000607241 877 ntBASIC24.82■■□□□ 1.56
SNED1Q8TER0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC24.82■■□□□ 1.56
SNED1Q8TER0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SNED1Q8TER0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
SNED1Q8TER0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.81■■□□□ 1.56
SNED1Q8TER0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
SNED1Q8TER0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SNED1Q8TER0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SNED1Q8TER0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.81■■□□□ 1.56
SNED1Q8TER0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.81■■□□□ 1.56
SNED1Q8TER0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SNED1Q8TER0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SNED1Q8TER0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SNED1Q8TER0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC24.81■■□□□ 1.56
SNED1Q8TER0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC24.81■■□□□ 1.56
SNED1Q8TER0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC24.81■■□□□ 1.56
SNED1Q8TER0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC24.81■■□□□ 1.56
SNED1Q8TER0 DUT-205ENST00000558813 769 ntTSL 2 BASIC24.81■■□□□ 1.56
SNED1Q8TER0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC24.81■■□□□ 1.56
SNED1Q8TER0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
SNED1Q8TER0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC24.81■■□□□ 1.56
SNED1Q8TER0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC24.81■■□□□ 1.56
SNED1Q8TER0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SNED1Q8TER0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SNED1Q8TER0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
SNED1Q8TER0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SNED1Q8TER0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SNED1Q8TER0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SNED1Q8TER0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SNED1Q8TER0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
SNED1Q8TER0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
SNED1Q8TER0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC24.8■■□□□ 1.56
SNED1Q8TER0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC24.8■■□□□ 1.56
SNED1Q8TER0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms