Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 AC009237.3-201ENST00000393279 1427 ntBASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 AL138724.1-201ENST00000606771 1088 ntBASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 AC093503.3-201ENST00000624917 2352 ntBASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 AL691432.2-201ENST00000607222 2038 ntBASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.49■□□□□ 0.55
CNIH3Q8TBE1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 AC026471.1-201ENST00000564629 3026 ntBASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 AC061975.6-201ENST00000579045 1553 ntBASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNIH3Q8TBE1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 MIR3621-201ENST00000580529 85 ntBASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH3Q8TBE1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH3Q8TBE1 AP004607.4-201ENST00000530158 1459 ntBASIC18.46■□□□□ 0.55
CNIH3Q8TBE1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH3Q8TBE1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH3Q8TBE1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms