Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNIP1Q8TAD8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNIP1Q8TAD8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNIP1Q8TAD8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNIP1Q8TAD8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SNIP1Q8TAD8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNIP1Q8TAD8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.16■□□□□ 0.66
SNIP1Q8TAD8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNIP1Q8TAD8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.16■□□□□ 0.66
SNIP1Q8TAD8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SNIP1Q8TAD8 AC073195.1-201ENST00000607241 877 ntBASIC19.16■□□□□ 0.66
SNIP1Q8TAD8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SNIP1Q8TAD8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNIP1Q8TAD8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SNIP1Q8TAD8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNIP1Q8TAD8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.16■□□□□ 0.66
SNIP1Q8TAD8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNIP1Q8TAD8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 AL121829.2-201ENST00000620908 328 ntBASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
SNIP1Q8TAD8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.14■□□□□ 0.66
SNIP1Q8TAD8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SNIP1Q8TAD8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SNIP1Q8TAD8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.14■□□□□ 0.66
SNIP1Q8TAD8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 UNC93B2-201ENST00000285383 730 ntBASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 KRT18P57-201ENST00000443599 1254 ntBASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 NUDT16P1-203ENST00000513809 620 ntBASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 LINC01568-207ENST00000641790 1380 ntBASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 KRT8P9-201ENST00000558927 1449 ntBASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 AC079598.2-202ENST00000546624 1451 ntBASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNIP1Q8TAD8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 TERF1P1-201ENST00000311003 1181 ntBASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 AL031963.3-201ENST00000606441 850 ntBASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNIP1Q8TAD8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms