Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
CLDND2Q8NHS1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDND2Q8NHS1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDND2Q8NHS1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CLDND2Q8NHS1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLDND2Q8NHS1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDND2Q8NHS1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 PRORSD1P-201ENST00000295112 541 ntBASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 KRT18P68-201ENST00000392293 1000 ntBASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDND2Q8NHS1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 AF106564.1-201ENST00000607058 2553 ntBASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDND2Q8NHS1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 FEM1AP4-201ENST00000443167 1987 ntBASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 UNC93B5-201ENST00000530315 699 ntBASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 AC116050.2-201ENST00000612102 1779 ntBASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 CYP21A1P-202ENST00000354927 1481 ntBASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 Z98882.1-201ENST00000622160 2253 ntBASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 AL391422.3-201ENST00000603791 2761 ntBASIC17.17■□□□□ 0.34
CLDND2Q8NHS1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 AC006058.3-201ENST00000606217 1069 ntBASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms