Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPSF7Q8N684 AC087289.5-201ENST00000586076 3175 ntBASIC19.77■□□□□ 0.76
CPSF7Q8N684 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.77■□□□□ 0.76
CPSF7Q8N684 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPSF7Q8N684 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CPSF7Q8N684 AC116562.4-201ENST00000641316 2276 ntBASIC19.77■□□□□ 0.76
CPSF7Q8N684 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPSF7Q8N684 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPSF7Q8N684 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPSF7Q8N684 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CPSF7Q8N684 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
CPSF7Q8N684 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CPSF7Q8N684 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.77■□□□□ 0.76
CPSF7Q8N684 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPSF7Q8N684 EEF1DP3-203ENST00000566025 782 ntBASIC19.77■□□□□ 0.76
CPSF7Q8N684 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.77■□□□□ 0.76
CPSF7Q8N684 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPSF7Q8N684 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPSF7Q8N684 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CPSF7Q8N684 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.77■□□□□ 0.75
CPSF7Q8N684 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CPSF7Q8N684 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CPSF7Q8N684 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.75
CPSF7Q8N684 AC004854.2-201ENST00000608450 1441 ntBASIC19.76■□□□□ 0.75
CPSF7Q8N684 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPSF7Q8N684 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPSF7Q8N684 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPSF7Q8N684 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPSF7Q8N684 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPSF7Q8N684 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CPSF7Q8N684 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPSF7Q8N684 AC053503.5-201ENST00000601508 636 ntBASIC19.76■□□□□ 0.75
CPSF7Q8N684 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.76■□□□□ 0.75
CPSF7Q8N684 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPSF7Q8N684 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPSF7Q8N684 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPSF7Q8N684 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPSF7Q8N684 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CPSF7Q8N684 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPSF7Q8N684 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.75■□□□□ 0.75
CPSF7Q8N684 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.75■□□□□ 0.75
CPSF7Q8N684 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.75■□□□□ 0.75
CPSF7Q8N684 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.75■□□□□ 0.75
CPSF7Q8N684 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPSF7Q8N684 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CPSF7Q8N684 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPSF7Q8N684 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.75■□□□□ 0.75
CPSF7Q8N684 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPSF7Q8N684 AL020996.1-203ENST00000536896 2307 ntBASIC19.75■□□□□ 0.75
CPSF7Q8N684 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.75■□□□□ 0.75
CPSF7Q8N684 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CPSF7Q8N684 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPSF7Q8N684 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPSF7Q8N684 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.74■□□□□ 0.75
CPSF7Q8N684 AC061975.6-201ENST00000579045 1553 ntBASIC19.74■□□□□ 0.75
CPSF7Q8N684 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.74■□□□□ 0.75
CPSF7Q8N684 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPSF7Q8N684 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPSF7Q8N684 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CPSF7Q8N684 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPSF7Q8N684 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPSF7Q8N684 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.74■□□□□ 0.75
CPSF7Q8N684 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CPSF7Q8N684 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPSF7Q8N684 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.74■□□□□ 0.75
CPSF7Q8N684 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.74■□□□□ 0.75
CPSF7Q8N684 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CPSF7Q8N684 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPSF7Q8N684 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.74■□□□□ 0.75
CPSF7Q8N684 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.74■□□□□ 0.75
CPSF7Q8N684 AC137761.2-201ENST00000561729 223 ntBASIC19.74■□□□□ 0.75
CPSF7Q8N684 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.74■□□□□ 0.75
CPSF7Q8N684 AC145350.3-201ENST00000569033 163 ntBASIC19.74■□□□□ 0.75
CPSF7Q8N684 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.74■□□□□ 0.75
CPSF7Q8N684 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPSF7Q8N684 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPSF7Q8N684 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPSF7Q8N684 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPSF7Q8N684 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.73■□□□□ 0.75
CPSF7Q8N684 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.73■□□□□ 0.75
CPSF7Q8N684 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPSF7Q8N684 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPSF7Q8N684 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPSF7Q8N684 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.73■□□□□ 0.75
CPSF7Q8N684 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPSF7Q8N684 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPSF7Q8N684 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CPSF7Q8N684 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPSF7Q8N684 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.73■□□□□ 0.75
CPSF7Q8N684 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.73■□□□□ 0.75
CPSF7Q8N684 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.73■□□□□ 0.75
CPSF7Q8N684 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.73■□□□□ 0.75
CPSF7Q8N684 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.73■□□□□ 0.75
CPSF7Q8N684 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPSF7Q8N684 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPSF7Q8N684 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPSF7Q8N684 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPSF7Q8N684 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPSF7Q8N684 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPSF7Q8N684 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms