Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
VPS52Q8N1B4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.95■■□□□ 1.1
VPS52Q8N1B4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VPS52Q8N1B4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS52Q8N1B4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS52Q8N1B4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS52Q8N1B4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS52Q8N1B4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.95■■□□□ 1.1
VPS52Q8N1B4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS52Q8N1B4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VPS52Q8N1B4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VPS52Q8N1B4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS52Q8N1B4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS52Q8N1B4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
VPS52Q8N1B4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS52Q8N1B4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS52Q8N1B4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
VPS52Q8N1B4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.93■■□□□ 1.1
VPS52Q8N1B4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS52Q8N1B4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
VPS52Q8N1B4 POM121L13P-201ENST00000422362 380 ntBASIC21.93■■□□□ 1.1
VPS52Q8N1B4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.93■■□□□ 1.1
VPS52Q8N1B4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.93■■□□□ 1.1
VPS52Q8N1B4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
VPS52Q8N1B4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.93■■□□□ 1.1
VPS52Q8N1B4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.93■■□□□ 1.1
VPS52Q8N1B4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
VPS52Q8N1B4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.93■■□□□ 1.1
VPS52Q8N1B4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.93■■□□□ 1.1
VPS52Q8N1B4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.93■■□□□ 1.1
VPS52Q8N1B4 C2orf69P4-201ENST00000565394 541 ntBASIC21.93■■□□□ 1.1
VPS52Q8N1B4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
VPS52Q8N1B4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.93■■□□□ 1.1
VPS52Q8N1B4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.93■■□□□ 1.1
VPS52Q8N1B4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS52Q8N1B4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS52Q8N1B4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS52Q8N1B4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VPS52Q8N1B4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS52Q8N1B4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.92■■□□□ 1.1
VPS52Q8N1B4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS52Q8N1B4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VPS52Q8N1B4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
VPS52Q8N1B4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.92■■□□□ 1.1
VPS52Q8N1B4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS52Q8N1B4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.92■■□□□ 1.1
VPS52Q8N1B4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS52Q8N1B4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
VPS52Q8N1B4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS52Q8N1B4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
VPS52Q8N1B4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
VPS52Q8N1B4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS52Q8N1B4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.91■■□□□ 1.1
VPS52Q8N1B4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS52Q8N1B4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VPS52Q8N1B4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
VPS52Q8N1B4 Z99916.2-201ENST00000604037 246 ntBASIC21.91■■□□□ 1.1
VPS52Q8N1B4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VPS52Q8N1B4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.91■■□□□ 1.1
VPS52Q8N1B4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS52Q8N1B4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.91■■□□□ 1.1
VPS52Q8N1B4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS52Q8N1B4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.9■■□□□ 1.1
VPS52Q8N1B4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.9■■□□□ 1.1
VPS52Q8N1B4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms