Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.08■□□□□ 0.97
NPAS3Q8IXF0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.08■□□□□ 0.97
NPAS3Q8IXF0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.08■□□□□ 0.97
NPAS3Q8IXF0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NPAS3Q8IXF0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.08■□□□□ 0.97
NPAS3Q8IXF0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.08■□□□□ 0.96
NPAS3Q8IXF0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NPAS3Q8IXF0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NPAS3Q8IXF0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.08■□□□□ 0.96
NPAS3Q8IXF0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NPAS3Q8IXF0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 ECEL1P1-201ENST00000373592 1742 ntBASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 AC087499.1-201ENST00000418141 1075 ntBASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 KRT18P21-201ENST00000515767 1272 ntBASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
NPAS3Q8IXF0 AC011484.1-201ENST00000377652 1995 ntBASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 AL355075.4-201ENST00000554988 638 ntBASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 AC010331.1-201ENST00000611423 582 ntBASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 AC133561.5-201ENST00000635547 218 ntBASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS3Q8IXF0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.05■□□□□ 0.96
NPAS3Q8IXF0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS3Q8IXF0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS3Q8IXF0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS3Q8IXF0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NPAS3Q8IXF0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS3Q8IXF0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.05■□□□□ 0.96
NPAS3Q8IXF0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS3Q8IXF0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
NPAS3Q8IXF0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.05■□□□□ 0.96
NPAS3Q8IXF0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.05■□□□□ 0.96
NPAS3Q8IXF0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
NPAS3Q8IXF0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.05■□□□□ 0.96
NPAS3Q8IXF0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS3Q8IXF0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS3Q8IXF0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NPAS3Q8IXF0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS3Q8IXF0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NPAS3Q8IXF0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS3Q8IXF0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS3Q8IXF0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.04■□□□□ 0.96
NPAS3Q8IXF0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS3Q8IXF0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS3Q8IXF0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS3Q8IXF0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS3Q8IXF0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS3Q8IXF0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
NPAS3Q8IXF0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS3Q8IXF0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS3Q8IXF0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.04■□□□□ 0.96
NPAS3Q8IXF0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS3Q8IXF0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
NPAS3Q8IXF0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS3Q8IXF0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS3Q8IXF0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
NPAS3Q8IXF0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.03■□□□□ 0.96
NPAS3Q8IXF0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS3Q8IXF0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS3Q8IXF0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS3Q8IXF0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
NPAS3Q8IXF0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS3Q8IXF0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS3Q8IXF0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.03■□□□□ 0.96
NPAS3Q8IXF0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS3Q8IXF0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS3Q8IXF0 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.03■□□□□ 0.96
NPAS3Q8IXF0 AL121829.2-201ENST00000620908 328 ntBASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms