Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM48Q8IWZ4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM48Q8IWZ4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM48Q8IWZ4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
TRIM48Q8IWZ4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM48Q8IWZ4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM48Q8IWZ4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM48Q8IWZ4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM48Q8IWZ4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM48Q8IWZ4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM48Q8IWZ4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM48Q8IWZ4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM48Q8IWZ4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM48Q8IWZ4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM48Q8IWZ4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM48Q8IWZ4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM48Q8IWZ4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM48Q8IWZ4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM48Q8IWZ4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM48Q8IWZ4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM48Q8IWZ4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM48Q8IWZ4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM48Q8IWZ4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM48Q8IWZ4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM48Q8IWZ4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM48Q8IWZ4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRIM48Q8IWZ4 POU5F1P3-201ENST00000428824 1078 ntBASIC19.85■□□□□ 0.77
TRIM48Q8IWZ4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM48Q8IWZ4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.85■□□□□ 0.77
TRIM48Q8IWZ4 AC060766.5-201ENST00000590539 871 ntBASIC19.85■□□□□ 0.77
TRIM48Q8IWZ4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM48Q8IWZ4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM48Q8IWZ4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM48Q8IWZ4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM48Q8IWZ4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 C2orf69P4-201ENST00000565394 541 ntBASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 TMEM191A-211ENST00000637163 1067 ntBASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 HLA-B-256ENST00000639848 1089 ntBASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM48Q8IWZ4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM48Q8IWZ4 AC092368.3-202ENST00000574180 1591 ntBASIC19.83■□□□□ 0.77
TRIM48Q8IWZ4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM48Q8IWZ4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM48Q8IWZ4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM48Q8IWZ4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM48Q8IWZ4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM48Q8IWZ4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM48Q8IWZ4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TRIM48Q8IWZ4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM48Q8IWZ4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM48Q8IWZ4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.83■□□□□ 0.76
TRIM48Q8IWZ4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
TRIM48Q8IWZ4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM48Q8IWZ4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
TRIM48Q8IWZ4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM48Q8IWZ4 AF106564.1-201ENST00000607058 2553 ntBASIC19.83■□□□□ 0.76
TRIM48Q8IWZ4 AC027702.1-201ENST00000563810 1770 ntBASIC19.83■□□□□ 0.76
TRIM48Q8IWZ4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM48Q8IWZ4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM48Q8IWZ4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
TRIM48Q8IWZ4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM48Q8IWZ4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM48Q8IWZ4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM48Q8IWZ4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM48Q8IWZ4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM48Q8IWZ4 ESRRAP1-201ENST00000400596 1257 ntBASIC19.82■□□□□ 0.76
TRIM48Q8IWZ4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.82■□□□□ 0.76
TRIM48Q8IWZ4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM48Q8IWZ4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.82■□□□□ 0.76
TRIM48Q8IWZ4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM48Q8IWZ4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM48Q8IWZ4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM48Q8IWZ4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
TRIM48Q8IWZ4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM48Q8IWZ4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM48Q8IWZ4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM48Q8IWZ4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
TRIM48Q8IWZ4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRIM48Q8IWZ4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM48Q8IWZ4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM48Q8IWZ4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM48Q8IWZ4 KRT18P29-201ENST00000397031 1267 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms