Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 LETM1P2-201ENST00000597330 2178 ntBASIC18.62■□□□□ 0.57
TUBA1AQ71U36 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 AC112907.3-201ENST00000577781 2400 ntBASIC18.62■□□□□ 0.57
TUBA1AQ71U36 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBA1AQ71U36 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 AC003102.1-202ENST00000563394 1796 ntBASIC18.61■□□□□ 0.57
TUBA1AQ71U36 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBA1AQ71U36 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TUBA1AQ71U36 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TUBA1AQ71U36 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.6■□□□□ 0.57
TUBA1AQ71U36 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBA1AQ71U36 AC116562.4-201ENST00000641316 2276 ntBASIC18.6■□□□□ 0.57
TUBA1AQ71U36 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBA1AQ71U36 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBA1AQ71U36 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.6■□□□□ 0.57
TUBA1AQ71U36 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TUBA1AQ71U36 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TUBA1AQ71U36 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.6■□□□□ 0.57
TUBA1AQ71U36 AC007225.1-201ENST00000566331 1836 ntBASIC18.6■□□□□ 0.57
TUBA1AQ71U36 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBA1AQ71U36 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBA1AQ71U36 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TUBA1AQ71U36 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TUBA1AQ71U36 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBA1AQ71U36 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBA1AQ71U36 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 AP004607.4-201ENST00000530158 1459 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms