Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
CCDC141Q6ZP82 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC141Q6ZP82 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC141Q6ZP82 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC141Q6ZP82 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
CCDC141Q6ZP82 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC141Q6ZP82 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
CCDC141Q6ZP82 AP003071.4-201ENST00000562276 1284 ntBASIC30.51■■■□□ 2.48
CCDC141Q6ZP82 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
CCDC141Q6ZP82 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC30.51■■■□□ 2.48
CCDC141Q6ZP82 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC30.51■■■□□ 2.48
CCDC141Q6ZP82 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CCDC141Q6ZP82 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC30.51■■■□□ 2.47
CCDC141Q6ZP82 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC30.51■■■□□ 2.47
CCDC141Q6ZP82 HTR7P1-201ENST00000538670 1336 ntBASIC30.51■■■□□ 2.47
CCDC141Q6ZP82 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CCDC141Q6ZP82 SAPCD2P4-201ENST00000424595 1171 ntBASIC30.5■■■□□ 2.47
CCDC141Q6ZP82 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
CCDC141Q6ZP82 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC141Q6ZP82 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC30.5■■■□□ 2.47
CCDC141Q6ZP82 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC30.5■■■□□ 2.47
CCDC141Q6ZP82 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC141Q6ZP82 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC30.5■■■□□ 2.47
CCDC141Q6ZP82 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC141Q6ZP82 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC30.5■■■□□ 2.47
CCDC141Q6ZP82 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC141Q6ZP82 PTBP1P-201ENST00000554374 1601 ntBASIC30.5■■■□□ 2.47
CCDC141Q6ZP82 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC30.5■■■□□ 2.47
CCDC141Q6ZP82 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC30.5■■■□□ 2.47
CCDC141Q6ZP82 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC30.5■■■□□ 2.47
CCDC141Q6ZP82 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC141Q6ZP82 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC30.5■■■□□ 2.47
CCDC141Q6ZP82 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC30.5■■■□□ 2.47
CCDC141Q6ZP82 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC141Q6ZP82 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC141Q6ZP82 NBPF21P-201ENST00000425093 1451 ntBASIC30.49■■■□□ 2.47
CCDC141Q6ZP82 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
CCDC141Q6ZP82 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC141Q6ZP82 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC141Q6ZP82 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
CCDC141Q6ZP82 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC141Q6ZP82 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC141Q6ZP82 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC141Q6ZP82 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
CCDC141Q6ZP82 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC30.48■■■□□ 2.47
CCDC141Q6ZP82 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC141Q6ZP82 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC141Q6ZP82 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC141Q6ZP82 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC141Q6ZP82 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC141Q6ZP82 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC141Q6ZP82 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC141Q6ZP82 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC141Q6ZP82 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC30.47■■■□□ 2.47
CCDC141Q6ZP82 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC30.47■■■□□ 2.47
CCDC141Q6ZP82 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC30.47■■■□□ 2.47
CCDC141Q6ZP82 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC30.47■■■□□ 2.47
CCDC141Q6ZP82 CD177P1-201ENST00000606252 935 ntBASIC30.47■■■□□ 2.47
CCDC141Q6ZP82 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
CCDC141Q6ZP82 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
CCDC141Q6ZP82 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC141Q6ZP82 SRI-203ENST00000419179 1307 ntTSL 2 BASIC30.47■■■□□ 2.47
CCDC141Q6ZP82 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC141Q6ZP82 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC141Q6ZP82 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC141Q6ZP82 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
CCDC141Q6ZP82 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC141Q6ZP82 FDX2-207ENST00000494368 584 ntTSL 4 BASIC30.46■■■□□ 2.47
CCDC141Q6ZP82 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC141Q6ZP82 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC30.46■■■□□ 2.47
CCDC141Q6ZP82 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC30.46■■■□□ 2.47
CCDC141Q6ZP82 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC30.46■■■□□ 2.47
CCDC141Q6ZP82 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC141Q6ZP82 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC141Q6ZP82 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC141Q6ZP82 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC141Q6ZP82 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
CCDC141Q6ZP82 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CCDC141Q6ZP82 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CCDC141Q6ZP82 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CCDC141Q6ZP82 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.47
CCDC141Q6ZP82 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC30.45■■■□□ 2.46
CCDC141Q6ZP82 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
CCDC141Q6ZP82 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
CCDC141Q6ZP82 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC141Q6ZP82 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC30.44■■■□□ 2.46
CCDC141Q6ZP82 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC30.44■■■□□ 2.46
CCDC141Q6ZP82 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC141Q6ZP82 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
CCDC141Q6ZP82 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC141Q6ZP82 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC141Q6ZP82 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC30.44■■■□□ 2.46
CCDC141Q6ZP82 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC141Q6ZP82 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC141Q6ZP82 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC141Q6ZP82 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC141Q6ZP82 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC30.44■■■□□ 2.46
CCDC141Q6ZP82 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC30.44■■■□□ 2.46
CCDC141Q6ZP82 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC30.44■■■□□ 2.46
CCDC141Q6ZP82 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms