Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 AP002371.2-201ENST00000624450 503 ntBASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PPP4R3CPQ6ZMV5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PPP4R3CPQ6ZMV5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.08■■□□□ 1.28
PPP4R3CPQ6ZMV5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
PPP4R3CPQ6ZMV5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PPP4R3CPQ6ZMV5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 GIMAP7-201ENST00000313543 1256 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 FAM220BP-201ENST00000377689 816 ntBASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 CNN2P6-201ENST00000439038 900 ntBASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 MTCO2P3-201ENST00000442543 421 ntBASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PPP4R3CPQ6ZMV5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 AC061975.6-201ENST00000579045 1553 ntBASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 ID1-201ENST00000376105 1233 ntBASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 AC007322.1-201ENST00000426983 750 ntBASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 AL512637.1-201ENST00000439523 1231 ntBASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 CSNK1A1P3-201ENST00000504105 330 ntBASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 AC097376.1-201ENST00000602907 997 ntBASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 AL162574.2-201ENST00000614618 657 ntBASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PPP4R3CPQ6ZMV5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PPP4R3CPQ6ZMV5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PPP4R3CPQ6ZMV5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.05■■□□□ 1.28
PPP4R3CPQ6ZMV5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PPP4R3CPQ6ZMV5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.05■■□□□ 1.28
PPP4R3CPQ6ZMV5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PPP4R3CPQ6ZMV5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.05■■□□□ 1.28
PPP4R3CPQ6ZMV5 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC23.05■■□□□ 1.28
PPP4R3CPQ6ZMV5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PPP4R3CPQ6ZMV5 TERF1P5-201ENST00000477545 1207 ntBASIC23.05■■□□□ 1.28
PPP4R3CPQ6ZMV5 MRPL22P1-201ENST00000505398 616 ntBASIC23.05■■□□□ 1.28
PPP4R3CPQ6ZMV5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.05■■□□□ 1.28
PPP4R3CPQ6ZMV5 AL451086.1-201ENST00000605596 223 ntBASIC23.05■■□□□ 1.28
PPP4R3CPQ6ZMV5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.05■■□□□ 1.28
PPP4R3CPQ6ZMV5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PPP4R3CPQ6ZMV5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 MIR663A-201ENST00000385250 93 ntBASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 AC007322.4-201ENST00000509611 723 ntBASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 AC021269.1-201ENST00000526860 705 ntBASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 AC013268.1-206ENST00000638368 961 ntBASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 AC112229.1-201ENST00000639295 961 ntBASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
PPP4R3CPQ6ZMV5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
PPP4R3CPQ6ZMV5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.03■■□□□ 1.28
PPP4R3CPQ6ZMV5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.03■■□□□ 1.28
PPP4R3CPQ6ZMV5 HACL1-206ENST00000435217 1269 ntTSL 2 BASIC23.03■■□□□ 1.28
PPP4R3CPQ6ZMV5 AC006970.2-201ENST00000450065 779 ntBASIC23.03■■□□□ 1.28
PPP4R3CPQ6ZMV5 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC23.03■■□□□ 1.28
PPP4R3CPQ6ZMV5 RN7SKP253-201ENST00000516424 309 ntBASIC23.03■■□□□ 1.28
PPP4R3CPQ6ZMV5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PPP4R3CPQ6ZMV5 AC004918.3-201ENST00000602609 925 ntBASIC23.03■■□□□ 1.28
PPP4R3CPQ6ZMV5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.03■■□□□ 1.28
PPP4R3CPQ6ZMV5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
PPP4R3CPQ6ZMV5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.03■■□□□ 1.28
PPP4R3CPQ6ZMV5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PPP4R3CPQ6ZMV5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PPP4R3CPQ6ZMV5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms