Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 AL137784.2-201ENST00000607332 1000 ntBASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 AC100791.3-201ENST00000617619 330 ntBASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 CYP21A1P-202ENST00000354927 1481 ntBASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.18■□□□□ 0.5
NHLRC1Q6VVB1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 AC007322.1-201ENST00000426983 750 ntBASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 AC073111.5-205ENST00000641717 521 ntBASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NHLRC1Q6VVB1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NHLRC1Q6VVB1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 AC087633.2-202ENST00000565166 1439 ntBASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms