Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 DUX4L2-201ENST00000561772 1275 ntBASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 DUX4L6-201ENST00000626483 1275 ntBASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 DUX4L1-201ENST00000627662 1275 ntBASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 DUX4L8-201ENST00000629013 1275 ntBASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 DUX4L3-201ENST00000630187 1275 ntBASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 DUX4L7-201ENST00000630678 1275 ntBASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 DUX4L5-201ENST00000630834 1275 ntBASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 AC026271.2-201ENST00000428091 497 ntBASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 MIR5787-201ENST00000611784 55 ntBASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 TNXA-203ENST00000507684 2038 ntBASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM53Q6P2H8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 MIR935-201ENST00000401179 91 ntBASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 AC008175.2-201ENST00000612840 297 ntBASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM53Q6P2H8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms