Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
CDC42BPAQ5VT25 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CDC42BPAQ5VT25 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
CDC42BPAQ5VT25 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CDC42BPAQ5VT25 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC30.98■■■□□ 2.55
CDC42BPAQ5VT25 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC30.98■■■□□ 2.55
CDC42BPAQ5VT25 REXO1L10P-201ENST00000615707 1290 ntBASIC30.98■■■□□ 2.55
CDC42BPAQ5VT25 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC30.98■■■□□ 2.55
CDC42BPAQ5VT25 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CDC42BPAQ5VT25 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CDC42BPAQ5VT25 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC30.98■■■□□ 2.55
CDC42BPAQ5VT25 AC011484.1-201ENST00000377652 1995 ntBASIC30.98■■■□□ 2.55
CDC42BPAQ5VT25 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CDC42BPAQ5VT25 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CDC42BPAQ5VT25 MIR6786-201ENST00000616843 113 ntBASIC30.98■■■□□ 2.55
CDC42BPAQ5VT25 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC30.98■■■□□ 2.55
CDC42BPAQ5VT25 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC30.97■■■□□ 2.55
CDC42BPAQ5VT25 NBPF21P-201ENST00000425093 1451 ntBASIC30.97■■■□□ 2.55
CDC42BPAQ5VT25 DYM-203ENST00000442713 2147 ntTSL 2 BASIC30.97■■■□□ 2.55
CDC42BPAQ5VT25 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CDC42BPAQ5VT25 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CDC42BPAQ5VT25 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CDC42BPAQ5VT25 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CDC42BPAQ5VT25 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CDC42BPAQ5VT25 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
CDC42BPAQ5VT25 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CDC42BPAQ5VT25 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC30.96■■■□□ 2.55
CDC42BPAQ5VT25 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDC42BPAQ5VT25 FDX2-207ENST00000494368 584 ntTSL 4 BASIC30.96■■■□□ 2.55
CDC42BPAQ5VT25 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC30.96■■■□□ 2.55
CDC42BPAQ5VT25 AL445228.2-201ENST00000605589 952 ntBASIC30.96■■■□□ 2.55
CDC42BPAQ5VT25 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CDC42BPAQ5VT25 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CDC42BPAQ5VT25 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDC42BPAQ5VT25 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC30.95■■■□□ 2.55
CDC42BPAQ5VT25 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC30.95■■■□□ 2.55
CDC42BPAQ5VT25 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC30.95■■■□□ 2.55
CDC42BPAQ5VT25 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC30.95■■■□□ 2.55
CDC42BPAQ5VT25 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CDC42BPAQ5VT25 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
CDC42BPAQ5VT25 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
CDC42BPAQ5VT25 SAPCD2P4-201ENST00000424595 1171 ntBASIC30.95■■■□□ 2.54
CDC42BPAQ5VT25 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
CDC42BPAQ5VT25 TK2-213ENST00000563369 882 ntTSL 5 BASIC30.95■■■□□ 2.54
CDC42BPAQ5VT25 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC30.95■■■□□ 2.54
CDC42BPAQ5VT25 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
CDC42BPAQ5VT25 HTR7P1-201ENST00000538670 1336 ntBASIC30.95■■■□□ 2.54
CDC42BPAQ5VT25 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC30.95■■■□□ 2.54
CDC42BPAQ5VT25 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CDC42BPAQ5VT25 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CDC42BPAQ5VT25 AC027702.1-201ENST00000563810 1770 ntBASIC30.94■■■□□ 2.54
CDC42BPAQ5VT25 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC30.94■■■□□ 2.54
CDC42BPAQ5VT25 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CDC42BPAQ5VT25 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC30.94■■■□□ 2.54
CDC42BPAQ5VT25 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC30.94■■■□□ 2.54
CDC42BPAQ5VT25 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CDC42BPAQ5VT25 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
CDC42BPAQ5VT25 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CDC42BPAQ5VT25 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC30.93■■■□□ 2.54
CDC42BPAQ5VT25 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC30.93■■■□□ 2.54
CDC42BPAQ5VT25 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
CDC42BPAQ5VT25 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC30.93■■■□□ 2.54
CDC42BPAQ5VT25 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
CDC42BPAQ5VT25 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CDC42BPAQ5VT25 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC30.93■■■□□ 2.54
CDC42BPAQ5VT25 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CDC42BPAQ5VT25 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CDC42BPAQ5VT25 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC30.93■■■□□ 2.54
CDC42BPAQ5VT25 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
CDC42BPAQ5VT25 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC30.93■■■□□ 2.54
CDC42BPAQ5VT25 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC30.93■■■□□ 2.54
CDC42BPAQ5VT25 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
CDC42BPAQ5VT25 P4HB-223ENST00000576390 439 ntTSL 4 BASIC30.93■■■□□ 2.54
CDC42BPAQ5VT25 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CDC42BPAQ5VT25 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CDC42BPAQ5VT25 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CDC42BPAQ5VT25 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC30.92■■■□□ 2.54
CDC42BPAQ5VT25 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
CDC42BPAQ5VT25 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC30.91■■■□□ 2.54
CDC42BPAQ5VT25 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CDC42BPAQ5VT25 FAM197Y1-201ENST00000421178 764 ntBASIC30.91■■■□□ 2.54
CDC42BPAQ5VT25 RBM17P1-201ENST00000453646 1190 ntBASIC30.91■■■□□ 2.54
CDC42BPAQ5VT25 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC30.91■■■□□ 2.54
CDC42BPAQ5VT25 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
CDC42BPAQ5VT25 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CDC42BPAQ5VT25 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CDC42BPAQ5VT25 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC30.9■■■□□ 2.54
CDC42BPAQ5VT25 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC30.9■■■□□ 2.54
CDC42BPAQ5VT25 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC30.9■■■□□ 2.54
CDC42BPAQ5VT25 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
CDC42BPAQ5VT25 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC30.9■■■□□ 2.54
CDC42BPAQ5VT25 AC079598.2-202ENST00000546624 1451 ntBASIC30.9■■■□□ 2.54
CDC42BPAQ5VT25 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CDC42BPAQ5VT25 STAC-204ENST00000457375 1366 ntTSL 2 BASIC30.9■■■□□ 2.54
CDC42BPAQ5VT25 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC30.9■■■□□ 2.54
CDC42BPAQ5VT25 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CDC42BPAQ5VT25 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CDC42BPAQ5VT25 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
CDC42BPAQ5VT25 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
CDC42BPAQ5VT25 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms