Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FREM1Q5H8C1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
FREM1Q5H8C1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FREM1Q5H8C1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FREM1Q5H8C1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.86■□□□□ 0.45
FREM1Q5H8C1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
FREM1Q5H8C1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
FREM1Q5H8C1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.86■□□□□ 0.45
FREM1Q5H8C1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
FREM1Q5H8C1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 AC142381.4-202ENST00000563973 229 ntBASIC17.85■□□□□ 0.45
FREM1Q5H8C1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.85■□□□□ 0.45
FREM1Q5H8C1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 POM121L13P-201ENST00000422362 380 ntBASIC17.84■□□□□ 0.45
FREM1Q5H8C1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 AC092667.1-201ENST00000434301 2586 ntBASIC17.84■□□□□ 0.45
FREM1Q5H8C1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 AC092368.3-202ENST00000574180 1591 ntBASIC17.84■□□□□ 0.45
FREM1Q5H8C1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
FREM1Q5H8C1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
FREM1Q5H8C1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FREM1Q5H8C1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
FREM1Q5H8C1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FREM1Q5H8C1 PRORSD1P-201ENST00000295112 541 ntBASIC17.83■□□□□ 0.45
FREM1Q5H8C1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FREM1Q5H8C1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.83■□□□□ 0.45
FREM1Q5H8C1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.83■□□□□ 0.45
FREM1Q5H8C1 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.83■□□□□ 0.45
FREM1Q5H8C1 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.83■□□□□ 0.45
FREM1Q5H8C1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.83■□□□□ 0.45
FREM1Q5H8C1 TMEM191A-211ENST00000637163 1067 ntBASIC17.83■□□□□ 0.45
FREM1Q5H8C1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
FREM1Q5H8C1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FREM1Q5H8C1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FREM1Q5H8C1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.83■□□□□ 0.44
FREM1Q5H8C1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.83■□□□□ 0.44
FREM1Q5H8C1 AP005212.1-201ENST00000581547 1997 ntBASIC17.83■□□□□ 0.44
FREM1Q5H8C1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FREM1Q5H8C1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.83■□□□□ 0.44
FREM1Q5H8C1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FREM1Q5H8C1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
FREM1Q5H8C1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FREM1Q5H8C1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FREM1Q5H8C1 AC098590.1-201ENST00000468126 897 ntBASIC17.83■□□□□ 0.44
FREM1Q5H8C1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.83■□□□□ 0.44
FREM1Q5H8C1 AC069544.1-201ENST00000609399 999 ntBASIC17.83■□□□□ 0.44
FREM1Q5H8C1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FREM1Q5H8C1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FREM1Q5H8C1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FREM1Q5H8C1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FREM1Q5H8C1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FREM1Q5H8C1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.82■□□□□ 0.44
FREM1Q5H8C1 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.82■□□□□ 0.44
FREM1Q5H8C1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
FREM1Q5H8C1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FREM1Q5H8C1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.82■□□□□ 0.44
FREM1Q5H8C1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.82■□□□□ 0.44
FREM1Q5H8C1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.82■□□□□ 0.44
FREM1Q5H8C1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FREM1Q5H8C1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.82■□□□□ 0.44
FREM1Q5H8C1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
FREM1Q5H8C1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FREM1Q5H8C1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.82■□□□□ 0.44
FREM1Q5H8C1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 ESRRAP1-201ENST00000400596 1257 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms