Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 RARRES2P11-201ENST00000635158 484 ntBASIC18.91■□□□□ 0.62
RPS3AP61247 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS3AP61247 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS3AP61247 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS3AP61247 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS3AP61247 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS3AP61247 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPS3AP61247 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS3AP61247 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPS3AP61247 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.91■□□□□ 0.62
RPS3AP61247 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPS3AP61247 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS3AP61247 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPS3AP61247 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS3AP61247 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.9■□□□□ 0.62
RPS3AP61247 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.9■□□□□ 0.62
RPS3AP61247 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.9■□□□□ 0.62
RPS3AP61247 AC073314.1-201ENST00000568729 2216 ntBASIC18.9■□□□□ 0.62
RPS3AP61247 GABARAPL3-202ENST00000624044 1851 ntBASIC18.9■□□□□ 0.62
RPS3AP61247 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPS3AP61247 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPS3AP61247 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS3AP61247 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RPS3AP61247 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS3AP61247 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.9■□□□□ 0.62
RPS3AP61247 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
RPS3AP61247 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.9■□□□□ 0.62
RPS3AP61247 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.9■□□□□ 0.62
RPS3AP61247 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS3AP61247 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RPS3AP61247 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RPS3AP61247 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS3AP61247 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.9■□□□□ 0.62
RPS3AP61247 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.9■□□□□ 0.62
RPS3AP61247 AP005212.1-201ENST00000581547 1997 ntBASIC18.9■□□□□ 0.62
RPS3AP61247 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS3AP61247 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPS3AP61247 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
RPS3AP61247 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RPS3AP61247 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.89■□□□□ 0.61
RPS3AP61247 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
RPS3AP61247 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS3AP61247 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RPS3AP61247 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPS3AP61247 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS3AP61247 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS3AP61247 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS3AP61247 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.89■□□□□ 0.61
RPS3AP61247 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.89■□□□□ 0.61
RPS3AP61247 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.89■□□□□ 0.61
RPS3AP61247 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RPS3AP61247 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RPS3AP61247 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.89■□□□□ 0.61
RPS3AP61247 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS3AP61247 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.89■□□□□ 0.61
RPS3AP61247 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
RPS3AP61247 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS3AP61247 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.89■□□□□ 0.61
RPS3AP61247 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.89■□□□□ 0.61
RPS3AP61247 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPS3AP61247 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS3AP61247 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS3AP61247 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.88■□□□□ 0.61
RPS3AP61247 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
RPS3AP61247 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS3AP61247 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPS3AP61247 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS3AP61247 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.88■□□□□ 0.61
RPS3AP61247 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RPS3AP61247 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS3AP61247 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS3AP61247 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.88■□□□□ 0.61
RPS3AP61247 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPS3AP61247 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.88■□□□□ 0.61
RPS3AP61247 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.88■□□□□ 0.61
RPS3AP61247 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPS3AP61247 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.88■□□□□ 0.61
RPS3AP61247 KRT16P2-201ENST00000414673 1423 ntBASIC18.88■□□□□ 0.61
RPS3AP61247 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS3AP61247 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RPS3AP61247 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS3AP61247 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.88■□□□□ 0.61
RPS3AP61247 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS3AP61247 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS3AP61247 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS3AP61247 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPS3AP61247 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS3AP61247 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPS3AP61247 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPS3AP61247 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.87■□□□□ 0.61
RPS3AP61247 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.87■□□□□ 0.61
RPS3AP61247 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS3AP61247 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS3AP61247 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.87■□□□□ 0.61
RPS3AP61247 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.87■□□□□ 0.61
RPS3AP61247 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.87■□□□□ 0.61
RPS3AP61247 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.87■□□□□ 0.61
RPS3AP61247 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPS3AP61247 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS3AP61247 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms