Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN18P56856 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN18P56856 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN18P56856 AC005829.2-201ENST00000571422 1056 ntBASIC18.14■□□□□ 0.49
CLDN18P56856 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CLDN18P56856 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CLDN18P56856 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN18P56856 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
CLDN18P56856 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN18P56856 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN18P56856 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN18P56856 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CLDN18P56856 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLDN18P56856 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN18P56856 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLDN18P56856 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN18P56856 AC007225.1-201ENST00000566331 1836 ntBASIC18.14■□□□□ 0.49
CLDN18P56856 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN18P56856 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CLDN18P56856 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN18P56856 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN18P56856 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN18P56856 PRORSD1P-201ENST00000295112 541 ntBASIC18.13■□□□□ 0.49
CLDN18P56856 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN18P56856 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN18P56856 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN18P56856 AC128676.1-201ENST00000454392 318 ntBASIC18.13■□□□□ 0.49
CLDN18P56856 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN18P56856 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN18P56856 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.13■□□□□ 0.49
CLDN18P56856 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.13■□□□□ 0.49
CLDN18P56856 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.13■□□□□ 0.49
CLDN18P56856 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.13■□□□□ 0.49
CLDN18P56856 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN18P56856 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLDN18P56856 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN18P56856 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN18P56856 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN18P56856 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN18P56856 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN18P56856 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN18P56856 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN18P56856 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CLDN18P56856 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN18P56856 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN18P56856 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN18P56856 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN18P56856 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN18P56856 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN18P56856 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN18P56856 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN18P56856 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN18P56856 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN18P56856 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLDN18P56856 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN18P56856 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.12■□□□□ 0.49
CLDN18P56856 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN18P56856 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.12■□□□□ 0.49
CLDN18P56856 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CLDN18P56856 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN18P56856 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN18P56856 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN18P56856 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN18P56856 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN18P56856 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN18P56856 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.11■□□□□ 0.49
CLDN18P56856 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN18P56856 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN18P56856 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN18P56856 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLDN18P56856 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN18P56856 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN18P56856 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLDN18P56856 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN18P56856 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN18P56856 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN18P56856 AC008687.6-201ENST00000596318 630 ntBASIC18.11■□□□□ 0.49
CLDN18P56856 AC073648.6-201ENST00000641589 218 ntBASIC18.11■□□□□ 0.49
CLDN18P56856 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN18P56856 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLDN18P56856 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN18P56856 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLDN18P56856 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN18P56856 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN18P56856 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN18P56856 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN18P56856 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN18P56856 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN18P56856 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CLDN18P56856 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN18P56856 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN18P56856 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN18P56856 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN18P56856 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLDN18P56856 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN18P56856 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN18P56856 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN18P56856 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN18P56856 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN18P56856 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms