Protein–RNA interactions for Protein: P49957

TRM9, tRNA (carboxymethyluridine(34)-5-O)-methyltransferase, yeastyeast

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRM9P49957 MSN5YDR335W 3675 nt1.18□□□□□ -2.22
TRM9P49957 tV(UAC)BtV(UAC)B 74 nt1.18□□□□□ -2.22
TRM9P49957 tV(UAC)DtV(UAC)D 74 nt1.18□□□□□ -2.22
TRM9P49957 YJL022WYJL022W 309 nt1.18□□□□□ -2.22
TRM9P49957 YJR140W-AYJR140W-A 150 nt1.18□□□□□ -2.22
TRM9P49957 SWT1YOR166C 1377 nt1.18□□□□□ -2.22
TRM9P49957 RVS161YCR009C 798 nt1.17□□□□□ -2.22
TRM9P49957 YGL015CYGL015C 393 nt1.17□□□□□ -2.22
TRM9P49957 VPS55YJR044C 423 nt1.17□□□□□ -2.22
TRM9P49957 YLR285C-AYLR285C-A 171 nt1.17□□□□□ -2.22
TRM9P49957 YLR366WYLR366W 306 nt1.17□□□□□ -2.22
TRM9P49957 YNL146C-AYNL146C-A 195 nt1.17□□□□□ -2.22
TRM9P49957 HHT1YBR010W 411 nt1.17□□□□□ -2.22
TRM9P49957 YBR184WYBR184W 1572 nt1.17□□□□□ -2.22
TRM9P49957 AHC1YOR023C 1701 nt1.16□□□□□ -2.22
TRM9P49957 snR9snR9 187 nt1.16□□□□□ -2.22
TRM9P49957 YDR169C-AYDR169C-A 150 nt1.16□□□□□ -2.22
TRM9P49957 SNO3YFL060C 669 nt1.16□□□□□ -2.22
TRM9P49957 YIL020C-AYIL020C-A 339 nt1.16□□□□□ -2.22
TRM9P49957 COF1YLL050C 432 nt1.16□□□□□ -2.22
TRM9P49957 YBL073WYBL073W 312 nt1.16□□□□□ -2.22
TRM9P49957 SNO2YNL334C 669 nt1.16□□□□□ -2.22
TRM9P49957 YPL197CYPL197C 414 nt1.16□□□□□ -2.22
TRM9P49957 YPR096CYPR096C 303 nt1.16□□□□□ -2.22
TRM9P49957 TRM732YMR259C 4263 nt1.15□□□□□ -2.23
TRM9P49957 tT(UGU)Q1tT(UGU)Q1 76 nt1.15□□□□□ -2.23
TRM9P49957 EMC5YIL027C 426 nt1.15□□□□□ -2.23
TRM9P49957 ECM9YKR004C 1134 nt1.15□□□□□ -2.23
TRM9P49957 YOR152CYOR152C 771 nt1.15□□□□□ -2.23
TRM9P49957 CSM4YPL200W 471 nt1.15□□□□□ -2.23
TRM9P49957 RSM22YKL155C 1887 nt1.15□□□□□ -2.23
TRM9P49957 YAR009CYAR009C 3591 nt1.15□□□□□ -2.23
TRM9P49957 MAK10YEL053C 2202 nt1.15□□□□□ -2.23
TRM9P49957 VPS52YDR484W 1926 nt1.15□□□□□ -2.23
TRM9P49957 CDC24YAL041W 2565 nt1.14□□□□□ -2.23
TRM9P49957 SHE9YDR393W 1371 nt1.14□□□□□ -2.23
TRM9P49957 CIC1YHR052W 1131 nt1.14□□□□□ -2.23
TRM9P49957 CRG1YHR209W 876 nt1.14□□□□□ -2.23
TRM9P49957 UTP13YLR222C 2454 nt1.14□□□□□ -2.23
TRM9P49957 MAD1YGL086W 2250 nt1.14□□□□□ -2.23
TRM9P49957 SPO75YLL005C 2607 nt1.14□□□□□ -2.23
TRM9P49957 OSH6YKR003W 1347 nt1.14□□□□□ -2.23
TRM9P49957 APL2YKL135C 2181 nt1.13□□□□□ -2.23
TRM9P49957 YDR461C-AYDR461C-A 243 nt1.13□□□□□ -2.23
TRM9P49957 YEL018C-AYEL018C-A 534 nt1.13□□□□□ -2.23
TRM9P49957 MTC7YEL033W 420 nt1.13□□□□□ -2.23
TRM9P49957 YGR265WYGR265W 411 nt1.13□□□□□ -2.23
TRM9P49957 LRP1YHR081W 555 nt1.13□□□□□ -2.23
TRM9P49957 IRC19YLL033W 693 nt1.13□□□□□ -2.23
TRM9P49957 RPL33BYOR234C 324 nt1.13□□□□□ -2.23
TRM9P49957 YBR063CYBR063C 1215 nt1.13□□□□□ -2.23
TRM9P49957 DGR2YKL121W 2559 nt1.13□□□□□ -2.23
TRM9P49957 PAC1YOR269W 1485 nt1.12□□□□□ -2.23
TRM9P49957 MSH5YDL154W 2706 nt1.12□□□□□ -2.23
TRM9P49957 AZF1YOR113W 2745 nt1.12□□□□□ -2.23
TRM9P49957 MVP1YMR004W 1536 nt1.12□□□□□ -2.23
TRM9P49957 SMB1YER029C 591 nt1.12□□□□□ -2.23
TRM9P49957 CHZ1YER030W 462 nt1.12□□□□□ -2.23
TRM9P49957 YKL111CYKL111C 336 nt1.12□□□□□ -2.23
TRM9P49957 RRT15YLR162W-A 189 nt1.12□□□□□ -2.23
TRM9P49957 GRX5YPL059W 453 nt1.12□□□□□ -2.23
TRM9P49957 YDR220CYDR220C 294 nt1.11□□□□□ -2.23
TRM9P49957 YLR271WYLR271W 825 nt1.11□□□□□ -2.23
TRM9P49957 YMR254CYMR254C 309 nt1.11□□□□□ -2.23
TRM9P49957 YOR376WYOR376W 369 nt1.11□□□□□ -2.23
TRM9P49957 SEF1YBL066C 3447 nt1.11□□□□□ -2.23
TRM9P49957 RAD9YDR217C 3930 nt1.1□□□□□ -2.23
TRM9P49957 snR79snR79 84 nt1.1□□□□□ -2.23
TRM9P49957 YOL029CYOL029C 606 nt1.1□□□□□ -2.23
TRM9P49957 UFD2YDL190C 2886 nt1.1□□□□□ -2.23
TRM9P49957 YNL284C-BYNL284C-B 5268 nt1.1□□□□□ -2.23
TRM9P49957 SIP4YJL089W 2490 nt1.09□□□□□ -2.23
TRM9P49957 Q0255Q0255 1419 nt1.09□□□□□ -2.23
TRM9P49957 SCEIQ0160 708 nt1.09□□□□□ -2.23
TRM9P49957 SPC1YJR010C-A 285 nt1.09□□□□□ -2.23
TRM9P49957 CTK3YML112W 891 nt1.09□□□□□ -2.23
TRM9P49957 COX7YMR256C 183 nt1.09□□□□□ -2.23
TRM9P49957 YOL159CYOL159C 516 nt1.09□□□□□ -2.23
TRM9P49957 MUK1YPL070W 1839 nt1.08□□□□□ -2.24
TRM9P49957 SPO11YHL022C 1197 nt1.08□□□□□ -2.24
TRM9P49957 RPL42BYHR141C 321 nt1.08□□□□□ -2.24
TRM9P49957 YIR020CYIR020C 303 nt1.08□□□□□ -2.24
TRM9P49957 RPL42AYNL162W 321 nt1.08□□□□□ -2.24
TRM9P49957 HCH1YNL281W 462 nt1.08□□□□□ -2.24
TRM9P49957 YOR029WYOR029W 336 nt1.08□□□□□ -2.24
TRM9P49957 CLU1YMR012W 3834 nt1.08□□□□□ -2.24
TRM9P49957 UBP3YER151C 2739 nt1.08□□□□□ -2.24
TRM9P49957 AFR1YDR085C 1863 nt1.07□□□□□ -2.24
TRM9P49957 SEC5YDR166C 2916 nt1.07□□□□□ -2.24
TRM9P49957 YDL187CYDL187C 330 nt1.07□□□□□ -2.24
TRM9P49957 YER175W-AYER175W-A 165 nt1.07□□□□□ -2.24
TRM9P49957 SLX9YGR081C 633 nt1.07□□□□□ -2.24
TRM9P49957 YGR283CYGR283C 1026 nt1.07□□□□□ -2.24
TRM9P49957 SPO13YHR014W 876 nt1.07□□□□□ -2.24
TRM9P49957 RCN1YKL159C 636 nt1.07□□□□□ -2.24
TRM9P49957 RPL40BYKR094C 387 nt1.07□□□□□ -2.24
TRM9P49957 YOR161W-BYOR161W-B 261 nt1.07□□□□□ -2.24
TRM9P49957 YCS4YLR272C 3531 nt1.06□□□□□ -2.24
TRM9P49957 SMC4YLR086W 4257 nt1.06□□□□□ -2.24
TRM9P49957 RPC10YHR143W-A 213 nt1.06□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms