Protein–RNA interactions for Protein: P47093

LSM8, U6 snRNA-associated Sm-like protein LSm8, yeastyeast

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM8P47093 YDR169C-AYDR169C-A 150 nt0.49□□□□□ -2.33
LSM8P47093 RPL42BYHR141C 321 nt0.49□□□□□ -2.33
LSM8P47093 RPL16AYIL133C 600 nt0.49□□□□□ -2.33
LSM8P47093 GPX1YKL026C 504 nt0.49□□□□□ -2.33
LSM8P47093 RPL42AYNL162W 321 nt0.49□□□□□ -2.33
LSM8P47093 HCH1YNL281W 462 nt0.49□□□□□ -2.33
LSM8P47093 YBR221W-AYBR221W-A 105 nt0.49□□□□□ -2.33
LSM8P47093 15S_rRNA15S_rRNA 1649 nt0.49□□□□□ -2.33
LSM8P47093 REF2YDR195W 1602 nt0.49□□□□□ -2.33
LSM8P47093 CDC24YAL041W 2565 nt0.48□□□□□ -2.33
LSM8P47093 SMB1YER029C 591 nt0.48□□□□□ -2.33
LSM8P47093 MXR1YER042W 555 nt0.48□□□□□ -2.33
LSM8P47093 CAJ1YER048C 1176 nt0.48□□□□□ -2.33
LSM8P47093 LSM12YHR121W 564 nt0.48□□□□□ -2.33
LSM8P47093 TIM8YJR135W-A 264 nt0.48□□□□□ -2.33
LSM8P47093 CMC4YMR194C-B 222 nt0.48□□□□□ -2.33
LSM8P47093 SUS1YBR111W-A 291 nt0.48□□□□□ -2.33
LSM8P47093 NUT1YGL151W 3399 nt0.47□□□□□ -2.33
LSM8P47093 SWF1YDR126W 1011 nt0.47□□□□□ -2.33
LSM8P47093 RPS30AYLR287C-A 192 nt0.47□□□□□ -2.33
LSM8P47093 YMR158C-AYMR158C-A 138 nt0.47□□□□□ -2.33
LSM8P47093 YBR184WYBR184W 1572 nt0.47□□□□□ -2.33
LSM8P47093 YDR034C-CYDR034C-C 1317 nt0.46□□□□□ -2.34
LSM8P47093 YFL002W-BYFL002W-B 1317 nt0.46□□□□□ -2.34
LSM8P47093 YGR161W-AYGR161W-A 1317 nt0.46□□□□□ -2.34
LSM8P47093 YLR410W-AYLR410W-A 1317 nt0.46□□□□□ -2.34
LSM8P47093 YBL100W-AYBL100W-A 1317 nt0.46□□□□□ -2.34
LSM8P47093 YOR192C-AYOR192C-A 1317 nt0.46□□□□□ -2.34
LSM8P47093 YCL020WYCL020W 1317 nt0.46□□□□□ -2.34
LSM8P47093 YDL068WYDL068W 330 nt0.46□□□□□ -2.34
LSM8P47093 IES5YER092W 378 nt0.46□□□□□ -2.34
LSM8P47093 PKR1YMR123W 369 nt0.46□□□□□ -2.34
LSM8P47093 YBR012CYBR012C 420 nt0.46□□□□□ -2.34
LSM8P47093 MPT5YGL178W 2580 nt0.45□□□□□ -2.34
LSM8P47093 YDL196WYDL196W 330 nt0.45□□□□□ -2.34
LSM8P47093 RPL22BYFL034C-A 369 nt0.45□□□□□ -2.34
LSM8P47093 YIL030W-AYIL030W-A 339 nt0.45□□□□□ -2.34
LSM8P47093 YLR255CYLR255C 354 nt0.45□□□□□ -2.34
LSM8P47093 GIM5YML094W 492 nt0.45□□□□□ -2.34
LSM8P47093 YDL206WYDL206W 2289 nt0.45□□□□□ -2.34
LSM8P47093 SET3YKR029C 2256 nt0.45□□□□□ -2.34
LSM8P47093 SRP14YDL092W 441 nt0.44□□□□□ -2.34
LSM8P47093 YGR045CYGR045C 363 nt0.44□□□□□ -2.34
LSM8P47093 RNR4YGR180C 1038 nt0.44□□□□□ -2.34
LSM8P47093 BMT5YIL096C 1011 nt0.44□□□□□ -2.34
LSM8P47093 NBP1YLR457C 960 nt0.44□□□□□ -2.34
LSM8P47093 RIM20YOR275C 1986 nt0.44□□□□□ -2.34
LSM8P47093 IML1YJR138W 4755 nt0.44□□□□□ -2.34
LSM8P47093 OST5YGL226C-A 261 nt0.43□□□□□ -2.34
LSM8P47093 CLU1YMR012W 3834 nt0.43□□□□□ -2.34
LSM8P47093 RPL38YLR325C 237 nt0.42□□□□□ -2.34
LSM8P47093 YBR032WYBR032W 303 nt0.42□□□□□ -2.34
LSM8P47093 YPR172WYPR172W 603 nt0.42□□□□□ -2.34
LSM8P47093 YBR200W-AYBR200W-A 165 nt0.42□□□□□ -2.34
LSM8P47093 NOC3YLR002C 1992 nt0.42□□□□□ -2.34
LSM8P47093 DCP2YNL118C 2913 nt0.42□□□□□ -2.34
LSM8P47093 HDA3YPR179C 1968 nt0.41□□□□□ -2.34
LSM8P47093 SWI6YLR182W 2412 nt0.41□□□□□ -2.34
LSM8P47093 YOR199WYOR199W 330 nt0.41□□□□□ -2.34
LSM8P47093 LTE1YAL024C 4308 nt0.41□□□□□ -2.34
LSM8P47093 PIG1YLR273C 1947 nt0.4□□□□□ -2.34
LSM8P47093 YER038W-AYER038W-A 381 nt0.4□□□□□ -2.35
LSM8P47093 tT(AGU)BtT(AGU)B 73 nt0.4□□□□□ -2.35
LSM8P47093 tT(AGU)CtT(AGU)C 73 nt0.4□□□□□ -2.35
LSM8P47093 tT(AGU)DtT(AGU)D 73 nt0.4□□□□□ -2.35
LSM8P47093 tT(AGU)HtT(AGU)H 73 nt0.4□□□□□ -2.35
LSM8P47093 tT(AGU)I1tT(AGU)I1 73 nt0.4□□□□□ -2.35
LSM8P47093 tT(AGU)I2tT(AGU)I2 73 nt0.4□□□□□ -2.35
LSM8P47093 tT(AGU)JtT(AGU)J 73 nt0.4□□□□□ -2.35
LSM8P47093 tT(AGU)N1tT(AGU)N1 73 nt0.4□□□□□ -2.35
LSM8P47093 tT(AGU)N2tT(AGU)N2 73 nt0.4□□□□□ -2.35
LSM8P47093 tT(AGU)O1tT(AGU)O1 73 nt0.4□□□□□ -2.35
LSM8P47093 tT(AGU)O2tT(AGU)O2 73 nt0.4□□□□□ -2.35
LSM8P47093 YOP1YPR028W 543 nt0.4□□□□□ -2.35
LSM8P47093 NUT2YPR168W 474 nt0.4□□□□□ -2.35
LSM8P47093 STO1YMR125W 2586 nt0.4□□□□□ -2.35
LSM8P47093 snR59snR59 78 nt0.39□□□□□ -2.35
LSM8P47093 YDR003W-AYDR003W-A 123 nt0.39□□□□□ -2.35
LSM8P47093 ARV1YLR242C 966 nt0.39□□□□□ -2.35
LSM8P47093 RUF22RUF22 515 nt0.39□□□□□ -2.35
LSM8P47093 DAD1YDR016C 285 nt0.38□□□□□ -2.35
LSM8P47093 IRC2YDR112W 309 nt0.38□□□□□ -2.35
LSM8P47093 YGL109WYGL109W 324 nt0.38□□□□□ -2.35
LSM8P47093 YHR028W-AYHR028W-A 321 nt0.38□□□□□ -2.35
LSM8P47093 YPL119C-AYPL119C-A 264 nt0.38□□□□□ -2.35
LSM8P47093 PRP16YKR086W 3216 nt0.38□□□□□ -2.35
LSM8P47093 FIG4YNL325C 2640 nt0.38□□□□□ -2.35
LSM8P47093 GPM2YDL021W 936 nt0.37□□□□□ -2.35
LSM8P47093 snR83snR83 306 nt0.37□□□□□ -2.35
LSM8P47093 OCA6YDR067C 675 nt0.37□□□□□ -2.35
LSM8P47093 DFG10YIL049W 762 nt0.37□□□□□ -2.35
LSM8P47093 ATP20YPR020W 348 nt0.37□□□□□ -2.35
LSM8P47093 SLM6YBR266C 453 nt0.37□□□□□ -2.35
LSM8P47093 YCL023CYCL023C 348 nt0.37□□□□□ -2.35
LSM8P47093 ZIP1YDR285W 2628 nt0.37□□□□□ -2.35
LSM8P47093 SLD3YGL113W 2007 nt0.37□□□□□ -2.35
LSM8P47093 MDM32YOR147W 1869 nt0.36□□□□□ -2.35
LSM8P47093 YDR115WYDR115W 318 nt0.36□□□□□ -2.35
LSM8P47093 SRB7YDR308C 423 nt0.36□□□□□ -2.35
LSM8P47093 ECM12YHR021W-A 456 nt0.36□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 50.6 ms