Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCNN1AP37088 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCNN1AP37088 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.13■□□□□ 0.97
SCNN1AP37088 AC092667.1-201ENST00000434301 2586 ntBASIC21.13■□□□□ 0.97
SCNN1AP37088 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.13■□□□□ 0.97
SCNN1AP37088 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SCNN1AP37088 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCNN1AP37088 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCNN1AP37088 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCNN1AP37088 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCNN1AP37088 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCNN1AP37088 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCNN1AP37088 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.13■□□□□ 0.97
SCNN1AP37088 AC091874.3-201ENST00000512672 1195 ntBASIC21.13■□□□□ 0.97
SCNN1AP37088 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SCNN1AP37088 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.13■□□□□ 0.97
SCNN1AP37088 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCNN1AP37088 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCNN1AP37088 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCNN1AP37088 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.13■□□□□ 0.97
SCNN1AP37088 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCNN1AP37088 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.13■□□□□ 0.97
SCNN1AP37088 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.12■□□□□ 0.97
SCNN1AP37088 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
SCNN1AP37088 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCNN1AP37088 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.12■□□□□ 0.97
SCNN1AP37088 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.12■□□□□ 0.97
SCNN1AP37088 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SCNN1AP37088 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.12■□□□□ 0.97
SCNN1AP37088 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.12■□□□□ 0.97
SCNN1AP37088 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.12■□□□□ 0.97
SCNN1AP37088 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.12■□□□□ 0.97
SCNN1AP37088 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SCNN1AP37088 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.12■□□□□ 0.97
SCNN1AP37088 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SCNN1AP37088 AC023632.3-201ENST00000521633 145 ntBASIC21.12■□□□□ 0.97
SCNN1AP37088 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.12■□□□□ 0.97
SCNN1AP37088 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.12■□□□□ 0.97
SCNN1AP37088 MYC-209ENST00000641252 345 ntBASIC21.12■□□□□ 0.97
SCNN1AP37088 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCNN1AP37088 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SCNN1AP37088 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.12■□□□□ 0.97
SCNN1AP37088 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCNN1AP37088 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCNN1AP37088 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SCNN1AP37088 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCNN1AP37088 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCNN1AP37088 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCNN1AP37088 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCNN1AP37088 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCNN1AP37088 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SCNN1AP37088 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SCNN1AP37088 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCNN1AP37088 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCNN1AP37088 DUSP5P2-201ENST00000426873 1033 ntBASIC21.11■□□□□ 0.97
SCNN1AP37088 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SCNN1AP37088 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SCNN1AP37088 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.11■□□□□ 0.97
SCNN1AP37088 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.11■□□□□ 0.97
SCNN1AP37088 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCNN1AP37088 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.11■□□□□ 0.97
SCNN1AP37088 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.11■□□□□ 0.97
SCNN1AP37088 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.11■□□□□ 0.97
SCNN1AP37088 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCNN1AP37088 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCNN1AP37088 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SCNN1AP37088 PKD1P6-201ENST00000343738 4769 ntBASIC21.1■□□□□ 0.97
SCNN1AP37088 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.1■□□□□ 0.97
SCNN1AP37088 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.1■□□□□ 0.97
SCNN1AP37088 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCNN1AP37088 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCNN1AP37088 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCNN1AP37088 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCNN1AP37088 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.1■□□□□ 0.97
SCNN1AP37088 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCNN1AP37088 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SCNN1AP37088 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.1■□□□□ 0.97
SCNN1AP37088 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCNN1AP37088 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SCNN1AP37088 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.1■□□□□ 0.97
SCNN1AP37088 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCNN1AP37088 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.09■□□□□ 0.97
SCNN1AP37088 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCNN1AP37088 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.09■□□□□ 0.97
SCNN1AP37088 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SCNN1AP37088 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCNN1AP37088 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCNN1AP37088 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCNN1AP37088 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCNN1AP37088 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCNN1AP37088 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.09■□□□□ 0.97
SCNN1AP37088 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.09■□□□□ 0.97
SCNN1AP37088 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
SCNN1AP37088 AL031963.3-201ENST00000606441 850 ntBASIC21.09■□□□□ 0.97
SCNN1AP37088 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
SCNN1AP37088 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.09■□□□□ 0.97
SCNN1AP37088 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
SCNN1AP37088 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCNN1AP37088 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SCNN1AP37088 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms