Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 NUM1YDR150W 8247 nt2.74□□□□□ -1.97
MSH2P25847 NOT5YPR072W 1683 nt2.74□□□□□ -1.97
MSH2P25847 RBK1YCR036W 1002 nt2.74□□□□□ -1.97
MSH2P25847 SPO22YIL073C 2928 nt2.74□□□□□ -1.97
MSH2P25847 AXL1YPR122W 3627 nt2.74□□□□□ -1.97
MSH2P25847 OSW7YFR039C 1533 nt2.73□□□□□ -1.97
MSH2P25847 SGS1YMR190C 4344 nt2.73□□□□□ -1.97
MSH2P25847 FKS3YMR306W 5358 nt2.73□□□□□ -1.97
MSH2P25847 YDR239CYDR239C 2364 nt2.73□□□□□ -1.97
MSH2P25847 NEW1YPL226W 3591 nt2.73□□□□□ -1.97
MSH2P25847 YLR149CYLR149C 2193 nt2.73□□□□□ -1.97
MSH2P25847 YFL032WYFL032W 321 nt2.73□□□□□ -1.97
MSH2P25847 YOR072W-AYOR072W-A 249 nt2.73□□□□□ -1.97
MSH2P25847 YBR224WYBR224W 516 nt2.73□□□□□ -1.97
MSH2P25847 EDS1YBR033W 2760 nt2.73□□□□□ -1.97
MSH2P25847 YBR184WYBR184W 1572 nt2.73□□□□□ -1.97
MSH2P25847 PDR3YBL005W 2931 nt2.72□□□□□ -1.97
MSH2P25847 LYS9YNR050C 1341 nt2.72□□□□□ -1.97
MSH2P25847 ESC1YMR219W 4977 nt2.72□□□□□ -1.97
MSH2P25847 YER079C-AYER079C-A 339 nt2.72□□□□□ -1.97
MSH2P25847 RPL39YJL189W 156 nt2.72□□□□□ -1.97
MSH2P25847 PEP3YLR148W 2757 nt2.72□□□□□ -1.97
MSH2P25847 RPL32YBL092W 393 nt2.72□□□□□ -1.97
MSH2P25847 RKM1YPL208W 1752 nt2.72□□□□□ -1.97
MSH2P25847 YPL150WYPL150W 2706 nt2.71□□□□□ -1.98
MSH2P25847 ALK2YBL009W 2031 nt2.71□□□□□ -1.98
MSH2P25847 DFG16YOR030W 1860 nt2.71□□□□□ -1.98
MSH2P25847 RPO41YFL036W 4056 nt2.71□□□□□ -1.98
MSH2P25847 PHS1YJL097W 654 nt2.71□□□□□ -1.98
MSH2P25847 ACM1YPL267W 630 nt2.71□□□□□ -1.98
MSH2P25847 SGO1YOR073W 1773 nt2.71□□□□□ -1.98
MSH2P25847 SCH9YHR205W 2475 nt2.7□□□□□ -1.98
MSH2P25847 MNL2YLR057W 2550 nt2.7□□□□□ -1.98
MSH2P25847 SEF1YBL066C 3447 nt2.7□□□□□ -1.98
MSH2P25847 STE11YLR362W 2154 nt2.7□□□□□ -1.98
MSH2P25847 SWR1YDR334W 4545 nt2.69□□□□□ -1.98
MSH2P25847 KEL2YGR238C 2649 nt2.69□□□□□ -1.98
MSH2P25847 YIL059CYIL059C 366 nt2.69□□□□□ -1.98
MSH2P25847 YOR231C-AYOR231C-A 201 nt2.69□□□□□ -1.98
MSH2P25847 TMN3YER113C 2121 nt2.69□□□□□ -1.98
MSH2P25847 DAD3YBR233W-A 285 nt2.68□□□□□ -1.98
MSH2P25847 STB4YMR019W 2850 nt2.68□□□□□ -1.98
MSH2P25847 MGM1YOR211C 2646 nt2.68□□□□□ -1.98
MSH2P25847 SLN1YIL147C 3663 nt2.67□□□□□ -1.98
MSH2P25847 REV3YPL167C 4515 nt2.67□□□□□ -1.98
MSH2P25847 PAC1YOR269W 1485 nt2.67□□□□□ -1.98
MSH2P25847 UBP1YDL122W 2430 nt2.67□□□□□ -1.98
MSH2P25847 snR65snR65 100 nt2.67□□□□□ -1.98
MSH2P25847 YDR169C-AYDR169C-A 150 nt2.67□□□□□ -1.98
MSH2P25847 YDR183C-AYDR183C-A 258 nt2.67□□□□□ -1.98
MSH2P25847 FMP23YBR047W 528 nt2.67□□□□□ -1.98
MSH2P25847 PSD2YGR170W 3417 nt2.67□□□□□ -1.98
MSH2P25847 SRO77YBL106C 3033 nt2.67□□□□□ -1.98
MSH2P25847 STE5YDR103W 2754 nt2.66□□□□□ -1.98
MSH2P25847 INO80YGL150C 4470 nt2.66□□□□□ -1.98
MSH2P25847 SIR3YLR442C 2937 nt2.66□□□□□ -1.98
MSH2P25847 YHR007C-AYHR007C-A 216 nt2.66□□□□□ -1.98
MSH2P25847 RPA34YJL148W 702 nt2.66□□□□□ -1.98
MSH2P25847 YLR154W-EYLR154W-E 204 nt2.66□□□□□ -1.98
MSH2P25847 SGM1YJR134C 2124 nt2.66□□□□□ -1.98
MSH2P25847 PDR1YGL013C 3207 nt2.66□□□□□ -1.98
MSH2P25847 SET2YJL168C 2202 nt2.65□□□□□ -1.98
MSH2P25847 PEX8YGR077C 1770 nt2.65□□□□□ -1.99
MSH2P25847 YDR286CYDR286C 345 nt2.65□□□□□ -1.99
MSH2P25847 PAU8YAL068C 363 nt2.65□□□□□ -1.99
MSH2P25847 PAU20YOL161C 363 nt2.65□□□□□ -1.99
MSH2P25847 YOR333CYOR333C 417 nt2.65□□□□□ -1.99
MSH2P25847 VMR1YHL035C 4779 nt2.64□□□□□ -1.99
MSH2P25847 HYP2YEL034W 474 nt2.64□□□□□ -1.99
MSH2P25847 UBR1YGR184C 5853 nt2.64□□□□□ -1.99
MSH2P25847 MET18YIL128W 3099 nt2.63□□□□□ -1.99
MSH2P25847 PTP3YER075C 2787 nt2.63□□□□□ -1.99
MSH2P25847 VPH1YOR270C 2523 nt2.63□□□□□ -1.99
MSH2P25847 YMR194C-AYMR194C-A 225 nt2.63□□□□□ -1.99
MSH2P25847 YBL083CYBL083C 426 nt2.63□□□□□ -1.99
MSH2P25847 HHT1YBR010W 411 nt2.63□□□□□ -1.99
MSH2P25847 ZRG8YER033C 3231 nt2.63□□□□□ -1.99
MSH2P25847 SLM1YIL105C 2061 nt2.62□□□□□ -1.99
MSH2P25847 RPL35AYDL191W 363 nt2.62□□□□□ -1.99
MSH2P25847 YRB1YDR002W 606 nt2.62□□□□□ -1.99
MSH2P25847 YHR032W-AYHR032W-A 180 nt2.62□□□□□ -1.99
MSH2P25847 TAR1YLR154W-C 375 nt2.62□□□□□ -1.99
MSH2P25847 PHO2YDL106C 1680 nt2.62□□□□□ -1.99
MSH2P25847 SMC6YLR383W 3345 nt2.61□□□□□ -1.99
MSH2P25847 VTC3YPL019C 2508 nt2.61□□□□□ -1.99
MSH2P25847 CSN9YDR179C 489 nt2.61□□□□□ -1.99
MSH2P25847 YLR154W-AYLR154W-A 186 nt2.61□□□□□ -1.99
MSH2P25847 RPS17AYML024W 411 nt2.61□□□□□ -1.99
MSH2P25847 MNE1YOR350C 1992 nt2.61□□□□□ -1.99
MSH2P25847 MRP10YDL045W-A 288 nt2.6□□□□□ -1.99
MSH2P25847 YFH1YDL120W 525 nt2.6□□□□□ -1.99
MSH2P25847 YDR008CYDR008C 351 nt2.6□□□□□ -1.99
MSH2P25847 GCN4YEL009C 846 nt2.6□□□□□ -1.99
MSH2P25847 YHL041WYHL041W 450 nt2.6□□□□□ -1.99
MSH2P25847 YAR029WYAR029W 225 nt2.6□□□□□ -1.99
MSH2P25847 YOR394C-AYOR394C-A 168 nt2.6□□□□□ -1.99
MSH2P25847 OSH6YKR003W 1347 nt2.6□□□□□ -1.99
MSH2P25847 YPR097WYPR097W 3222 nt2.59□□□□□ -1.99
MSH2P25847 YCR022CYCR022C 345 nt2.59□□□□□ -1.99
MSH2P25847 YFL063WYFL063W 456 nt2.59□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 42.6 ms