Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH3P22223 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH3P22223 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDH3P22223 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH3P22223 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH3P22223 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH3P22223 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH3P22223 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDH3P22223 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CDH3P22223 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDH3P22223 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH3P22223 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.78■□□□□ 0.76
CDH3P22223 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.78■□□□□ 0.76
CDH3P22223 AC091874.3-201ENST00000512672 1195 ntBASIC19.78■□□□□ 0.76
CDH3P22223 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH3P22223 AL589743.5-201ENST00000616611 1050 ntBASIC19.78■□□□□ 0.76
CDH3P22223 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH3P22223 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH3P22223 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH3P22223 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.78■□□□□ 0.76
CDH3P22223 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH3P22223 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH3P22223 CYP21A1P-202ENST00000354927 1481 ntBASIC19.78■□□□□ 0.76
CDH3P22223 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDH3P22223 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH3P22223 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH3P22223 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH3P22223 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH3P22223 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH3P22223 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH3P22223 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDH3P22223 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDH3P22223 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH3P22223 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH3P22223 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH3P22223 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH3P22223 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CDH3P22223 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH3P22223 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDH3P22223 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH3P22223 KRT18P68-201ENST00000392293 1000 ntBASIC19.77■□□□□ 0.76
CDH3P22223 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.77■□□□□ 0.76
CDH3P22223 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.77■□□□□ 0.76
CDH3P22223 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.77■□□□□ 0.76
CDH3P22223 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH3P22223 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CDH3P22223 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CDH3P22223 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH3P22223 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH3P22223 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDH3P22223 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH3P22223 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH3P22223 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH3P22223 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
CDH3P22223 LINC01521-201ENST00000504184 1943 ntBASIC19.76■□□□□ 0.75
CDH3P22223 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH3P22223 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CDH3P22223 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH3P22223 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH3P22223 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH3P22223 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH3P22223 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH3P22223 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH3P22223 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH3P22223 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH3P22223 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CDH3P22223 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH3P22223 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CDH3P22223 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CDH3P22223 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CDH3P22223 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH3P22223 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH3P22223 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.76■□□□□ 0.75
CDH3P22223 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDH3P22223 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH3P22223 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH3P22223 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CDH3P22223 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH3P22223 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
CDH3P22223 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH3P22223 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH3P22223 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH3P22223 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH3P22223 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH3P22223 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH3P22223 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH3P22223 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH3P22223 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH3P22223 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH3P22223 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CDH3P22223 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH3P22223 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH3P22223 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH3P22223 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH3P22223 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH3P22223 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CDH3P22223 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CDH3P22223 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH3P22223 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH3P22223 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms