Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC010947.1-201ENST00000623454 693 ntBASIC25.05■■□□□ 1.6
COL11A2P13942 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL11A2P13942 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL11A2P13942 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL11A2P13942 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.05■■□□□ 1.6
COL11A2P13942 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC25.04■■□□□ 1.6
COL11A2P13942 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC25.04■■□□□ 1.6
COL11A2P13942 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC25.04■■□□□ 1.6
COL11A2P13942 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
COL11A2P13942 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COL11A2P13942 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL11A2P13942 AC073508.3-201ENST00000619697 1419 ntBASIC25.04■■□□□ 1.6
COL11A2P13942 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL11A2P13942 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL11A2P13942 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL11A2P13942 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC25.03■■□□□ 1.6
COL11A2P13942 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL11A2P13942 CRAT-202ENST00000393384 973 ntTSL 2 BASIC25.03■■□□□ 1.6
COL11A2P13942 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC25.03■■□□□ 1.6
COL11A2P13942 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC25.03■■□□□ 1.6
COL11A2P13942 PNN-205ENST00000556530 601 ntTSL 2 BASIC25.03■■□□□ 1.6
COL11A2P13942 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
COL11A2P13942 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC25.03■■□□□ 1.6
COL11A2P13942 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC25.03■■□□□ 1.6
COL11A2P13942 MIR2861-201ENST00000636310 90 ntBASIC25.03■■□□□ 1.6
COL11A2P13942 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
COL11A2P13942 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL11A2P13942 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC25.03■■□□□ 1.6
COL11A2P13942 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
COL11A2P13942 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL11A2P13942 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
COL11A2P13942 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC25.03■■□□□ 1.6
COL11A2P13942 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL11A2P13942 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL11A2P13942 LINC01568-207ENST00000641790 1380 ntBASIC25.02■■□□□ 1.6
COL11A2P13942 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
COL11A2P13942 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
COL11A2P13942 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL11A2P13942 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL11A2P13942 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.02■■□□□ 1.6
COL11A2P13942 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC25.02■■□□□ 1.6
COL11A2P13942 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
COL11A2P13942 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL11A2P13942 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL11A2P13942 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL11A2P13942 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.02■■□□□ 1.6
COL11A2P13942 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.02■■□□□ 1.6
COL11A2P13942 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.6
COL11A2P13942 ARMC10P1-201ENST00000313754 855 ntBASIC25.01■■□□□ 1.59
COL11A2P13942 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
COL11A2P13942 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL11A2P13942 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC25.01■■□□□ 1.59
COL11A2P13942 AC116562.2-201ENST00000507042 360 ntBASIC25.01■■□□□ 1.59
COL11A2P13942 KRT16P1-201ENST00000399124 1418 ntBASIC25.01■■□□□ 1.59
COL11A2P13942 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC25.01■■□□□ 1.59
COL11A2P13942 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC25.01■■□□□ 1.59
COL11A2P13942 PTBP1P-201ENST00000554374 1601 ntBASIC25.01■■□□□ 1.59
COL11A2P13942 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
COL11A2P13942 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
COL11A2P13942 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL11A2P13942 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
COL11A2P13942 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC25■■□□□ 1.59
COL11A2P13942 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25■■□□□ 1.59
COL11A2P13942 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL11A2P13942 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
COL11A2P13942 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
COL11A2P13942 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL11A2P13942 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC25■■□□□ 1.59
COL11A2P13942 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC25■■□□□ 1.59
COL11A2P13942 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
COL11A2P13942 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25■■□□□ 1.59
COL11A2P13942 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL11A2P13942 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL11A2P13942 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
COL11A2P13942 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.99■■□□□ 1.59
COL11A2P13942 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL11A2P13942 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC24.99■■□□□ 1.59
COL11A2P13942 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL11A2P13942 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.99■■□□□ 1.59
COL11A2P13942 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
COL11A2P13942 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
COL11A2P13942 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
COL11A2P13942 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.98■■□□□ 1.59
COL11A2P13942 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
COL11A2P13942 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
COL11A2P13942 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.98■■□□□ 1.59
COL11A2P13942 DUX4L26-201ENST00000489078 1255 ntBASIC24.98■■□□□ 1.59
COL11A2P13942 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC24.98■■□□□ 1.59
COL11A2P13942 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC24.98■■□□□ 1.59
COL11A2P13942 AC005363.2-201ENST00000618631 242 ntBASIC24.98■■□□□ 1.59
COL11A2P13942 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL11A2P13942 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL11A2P13942 GOLGA2P6-201ENST00000340929 2049 ntBASIC24.98■■□□□ 1.59
COL11A2P13942 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
COL11A2P13942 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL11A2P13942 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
COL11A2P13942 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC24.98■■□□□ 1.59
COL11A2P13942 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL11A2P13942 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL11A2P13942 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms