Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.58■■□□□ 1.21
MMP3P08254 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.58■■□□□ 1.21
MMP3P08254 AL049796.1-201ENST00000565336 1766 ntBASIC22.58■■□□□ 1.2
MMP3P08254 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
MMP3P08254 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
MMP3P08254 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
MMP3P08254 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
MMP3P08254 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.57■■□□□ 1.2
MMP3P08254 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP3P08254 ECEL1P3-201ENST00000427961 737 ntBASIC22.57■■□□□ 1.2
MMP3P08254 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.57■■□□□ 1.2
MMP3P08254 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.57■■□□□ 1.2
MMP3P08254 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
MMP3P08254 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.57■■□□□ 1.2
MMP3P08254 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP3P08254 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP3P08254 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP3P08254 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
MMP3P08254 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP3P08254 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP3P08254 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
MMP3P08254 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
MMP3P08254 AC124283.5-201ENST00000624661 1809 ntBASIC22.57■■□□□ 1.2
MMP3P08254 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP3P08254 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
MMP3P08254 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MMP3P08254 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MMP3P08254 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.56■■□□□ 1.2
MMP3P08254 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.56■■□□□ 1.2
MMP3P08254 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
MMP3P08254 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
MMP3P08254 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.56■■□□□ 1.2
MMP3P08254 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.56■■□□□ 1.2
MMP3P08254 AL121829.2-201ENST00000620908 328 ntBASIC22.56■■□□□ 1.2
MMP3P08254 REXO1L12P-201ENST00000622156 912 ntBASIC22.56■■□□□ 1.2
MMP3P08254 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
MMP3P08254 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MMP3P08254 KRT17P2-201ENST00000300992 1314 ntBASIC22.56■■□□□ 1.2
MMP3P08254 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MMP3P08254 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
MMP3P08254 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.55■■□□□ 1.2
MMP3P08254 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
MMP3P08254 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
MMP3P08254 AC121338.2-201ENST00000622535 1744 ntBASIC22.55■■□□□ 1.2
MMP3P08254 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MMP3P08254 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MMP3P08254 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MMP3P08254 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
MMP3P08254 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
MMP3P08254 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MMP3P08254 AC211429.1-201ENST00000415277 523 ntBASIC22.55■■□□□ 1.2
MMP3P08254 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.55■■□□□ 1.2
MMP3P08254 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
MMP3P08254 BX088651.1-201ENST00000540551 451 ntBASIC22.55■■□□□ 1.2
MMP3P08254 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
MMP3P08254 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
MMP3P08254 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.55■■□□□ 1.2
MMP3P08254 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
MMP3P08254 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
MMP3P08254 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MMP3P08254 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.55■■□□□ 1.2
MMP3P08254 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.54■■□□□ 1.2
MMP3P08254 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.54■■□□□ 1.2
MMP3P08254 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.54■■□□□ 1.2
MMP3P08254 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
MMP3P08254 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.54■■□□□ 1.2
MMP3P08254 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.54■■□□□ 1.2
MMP3P08254 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.54■■□□□ 1.2
MMP3P08254 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.54■■□□□ 1.2
MMP3P08254 AC012676.1-201ENST00000574705 1949 ntBASIC22.54■■□□□ 1.2
MMP3P08254 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP3P08254 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP3P08254 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP3P08254 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.54■■□□□ 1.2
MMP3P08254 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP3P08254 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.53■■□□□ 1.2
MMP3P08254 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MMP3P08254 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.53■■□□□ 1.2
MMP3P08254 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
MMP3P08254 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.53■■□□□ 1.2
MMP3P08254 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.53■■□□□ 1.2
MMP3P08254 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
MMP3P08254 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.53■■□□□ 1.2
MMP3P08254 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
MMP3P08254 MIR4785-201ENST00000585005 73 ntBASIC22.53■■□□□ 1.2
MMP3P08254 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
MMP3P08254 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
MMP3P08254 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
MMP3P08254 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
MMP3P08254 AC133561.1-201ENST00000568600 2415 ntBASIC22.52■■□□□ 1.2
MMP3P08254 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.52■■□□□ 1.2
MMP3P08254 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
MMP3P08254 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
MMP3P08254 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.52■■□□□ 1.2
MMP3P08254 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
MMP3P08254 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
MMP3P08254 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.52■■□□□ 1.2
MMP3P08254 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
MMP3P08254 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
MMP3P08254 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms