Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSDP07339 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSDP07339 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTSDP07339 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CTSDP07339 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CTSDP07339 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.8■□□□□ 0.28
CTSDP07339 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSDP07339 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSDP07339 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CTSDP07339 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSDP07339 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTSDP07339 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.8■□□□□ 0.28
CTSDP07339 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSDP07339 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSDP07339 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTSDP07339 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CTSDP07339 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSDP07339 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSDP07339 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.8■□□□□ 0.28
CTSDP07339 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSDP07339 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTSDP07339 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.79■□□□□ 0.28
CTSDP07339 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.79■□□□□ 0.28
CTSDP07339 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.79■□□□□ 0.28
CTSDP07339 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSDP07339 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTSDP07339 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSDP07339 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTSDP07339 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.79■□□□□ 0.28
CTSDP07339 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSDP07339 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSDP07339 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.79■□□□□ 0.28
CTSDP07339 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTSDP07339 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTSDP07339 AC245052.3-201ENST00000450182 901 ntBASIC16.79■□□□□ 0.28
CTSDP07339 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTSDP07339 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.79■□□□□ 0.28
CTSDP07339 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.79■□□□□ 0.28
CTSDP07339 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.79■□□□□ 0.28
CTSDP07339 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CTSDP07339 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTSDP07339 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTSDP07339 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSDP07339 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CTSDP07339 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.79■□□□□ 0.28
CTSDP07339 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSDP07339 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSDP07339 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSDP07339 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTSDP07339 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSDP07339 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.79■□□□□ 0.28
CTSDP07339 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CTSDP07339 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSDP07339 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSDP07339 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.78■□□□□ 0.28
CTSDP07339 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.78■□□□□ 0.28
CTSDP07339 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
CTSDP07339 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.78■□□□□ 0.28
CTSDP07339 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.78■□□□□ 0.28
CTSDP07339 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CTSDP07339 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSDP07339 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.78■□□□□ 0.28
CTSDP07339 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CTSDP07339 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSDP07339 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSDP07339 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSDP07339 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSDP07339 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSDP07339 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSDP07339 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSDP07339 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSDP07339 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CTSDP07339 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTSDP07339 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSDP07339 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.78■□□□□ 0.28
CTSDP07339 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSDP07339 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSDP07339 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSDP07339 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSDP07339 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSDP07339 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
CTSDP07339 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CTSDP07339 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSDP07339 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CTSDP07339 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSDP07339 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTSDP07339 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTSDP07339 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSDP07339 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSDP07339 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CTSDP07339 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSDP07339 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.77■□□□□ 0.28
CTSDP07339 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSDP07339 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSDP07339 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.77■□□□□ 0.28
CTSDP07339 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTSDP07339 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSDP07339 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTSDP07339 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTSDP07339 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms