Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.93■□□□□ 0.94
IFNB1P01574 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
IFNB1P01574 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
IFNB1P01574 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.93■□□□□ 0.94
IFNB1P01574 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IFNB1P01574 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
IFNB1P01574 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.93■□□□□ 0.94
IFNB1P01574 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IFNB1P01574 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.93■□□□□ 0.94
IFNB1P01574 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.93■□□□□ 0.94
IFNB1P01574 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.93■□□□□ 0.94
IFNB1P01574 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IFNB1P01574 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
IFNB1P01574 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
IFNB1P01574 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IFNB1P01574 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
IFNB1P01574 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IFNB1P01574 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IFNB1P01574 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.92■□□□□ 0.94
IFNB1P01574 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
IFNB1P01574 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
IFNB1P01574 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.92■□□□□ 0.94
IFNB1P01574 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.92■□□□□ 0.94
IFNB1P01574 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IFNB1P01574 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.92■□□□□ 0.94
IFNB1P01574 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IFNB1P01574 KRT19P1-201ENST00000405746 1186 ntBASIC20.92■□□□□ 0.94
IFNB1P01574 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.92■□□□□ 0.94
IFNB1P01574 AC007322.3-201ENST00000426526 701 ntBASIC20.92■□□□□ 0.94
IFNB1P01574 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
IFNB1P01574 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.92■□□□□ 0.94
IFNB1P01574 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.92■□□□□ 0.94
IFNB1P01574 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
IFNB1P01574 AC243732.1-201ENST00000612648 864 ntBASIC20.92■□□□□ 0.94
IFNB1P01574 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.92■□□□□ 0.94
IFNB1P01574 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.92■□□□□ 0.94
IFNB1P01574 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
IFNB1P01574 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IFNB1P01574 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IFNB1P01574 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
IFNB1P01574 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IFNB1P01574 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
IFNB1P01574 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IFNB1P01574 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IFNB1P01574 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
IFNB1P01574 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
IFNB1P01574 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.91■□□□□ 0.94
IFNB1P01574 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
IFNB1P01574 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
IFNB1P01574 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
IFNB1P01574 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
IFNB1P01574 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IFNB1P01574 AC019069.1-201ENST00000610008 1333 ntBASIC20.91■□□□□ 0.94
IFNB1P01574 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.91■□□□□ 0.94
IFNB1P01574 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.91■□□□□ 0.94
IFNB1P01574 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
IFNB1P01574 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.9■□□□□ 0.94
IFNB1P01574 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IFNB1P01574 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.9■□□□□ 0.94
IFNB1P01574 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IFNB1P01574 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
IFNB1P01574 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
IFNB1P01574 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
IFNB1P01574 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
IFNB1P01574 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
IFNB1P01574 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IFNB1P01574 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
IFNB1P01574 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
IFNB1P01574 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
IFNB1P01574 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.9■□□□□ 0.94
IFNB1P01574 SLC7A5P1-201ENST00000568957 537 ntBASIC20.9■□□□□ 0.94
IFNB1P01574 KRT18P61-201ENST00000585825 1298 ntBASIC20.9■□□□□ 0.94
IFNB1P01574 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
IFNB1P01574 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.9■□□□□ 0.94
IFNB1P01574 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
IFNB1P01574 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.9■□□□□ 0.94
IFNB1P01574 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IFNB1P01574 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.9■□□□□ 0.94
IFNB1P01574 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
IFNB1P01574 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
IFNB1P01574 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
IFNB1P01574 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
IFNB1P01574 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
IFNB1P01574 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.89■□□□□ 0.94
IFNB1P01574 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IFNB1P01574 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IFNB1P01574 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IFNB1P01574 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
IFNB1P01574 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
IFNB1P01574 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.89■□□□□ 0.93
IFNB1P01574 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.89■□□□□ 0.93
IFNB1P01574 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IFNB1P01574 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IFNB1P01574 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IFNB1P01574 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
IFNB1P01574 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
IFNB1P01574 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
IFNB1P01574 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IFNB1P01574 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IFNB1P01574 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms