Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.06■□□□□ 0.16
IFNA1P01562 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
IFNA1P01562 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.06■□□□□ 0.16
IFNA1P01562 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
IFNA1P01562 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFNA1P01562 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.05■□□□□ 0.16
IFNA1P01562 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFNA1P01562 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFNA1P01562 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFNA1P01562 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFNA1P01562 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
IFNA1P01562 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.05■□□□□ 0.16
IFNA1P01562 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.05■□□□□ 0.16
IFNA1P01562 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.05■□□□□ 0.16
IFNA1P01562 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFNA1P01562 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IFNA1P01562 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.05■□□□□ 0.16
IFNA1P01562 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.05■□□□□ 0.16
IFNA1P01562 MIR4449-201ENST00000578365 66 ntBASIC16.05■□□□□ 0.16
IFNA1P01562 AC005332.7-201ENST00000614046 2005 ntBASIC16.05■□□□□ 0.16
IFNA1P01562 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.05■□□□□ 0.16
IFNA1P01562 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IFNA1P01562 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IFNA1P01562 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
IFNA1P01562 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFNA1P01562 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFNA1P01562 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFNA1P01562 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFNA1P01562 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.04■□□□□ 0.16
IFNA1P01562 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFNA1P01562 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IFNA1P01562 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFNA1P01562 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFNA1P01562 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
IFNA1P01562 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
IFNA1P01562 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFNA1P01562 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IFNA1P01562 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.04■□□□□ 0.16
IFNA1P01562 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IFNA1P01562 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
IFNA1P01562 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.04■□□□□ 0.16
IFNA1P01562 Z92544.1-202ENST00000571933 1220 ntBASIC16.04■□□□□ 0.16
IFNA1P01562 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.04■□□□□ 0.16
IFNA1P01562 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
IFNA1P01562 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFNA1P01562 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.04■□□□□ 0.16
IFNA1P01562 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFNA1P01562 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFNA1P01562 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IFNA1P01562 AC133637.1-201ENST00000624115 1537 ntBASIC16.04■□□□□ 0.16
IFNA1P01562 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.04■□□□□ 0.16
IFNA1P01562 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.03■□□□□ 0.16
IFNA1P01562 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IFNA1P01562 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFNA1P01562 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFNA1P01562 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFNA1P01562 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
IFNA1P01562 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
IFNA1P01562 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFNA1P01562 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFNA1P01562 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFNA1P01562 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFNA1P01562 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.03■□□□□ 0.16
IFNA1P01562 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IFNA1P01562 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.03■□□□□ 0.16
IFNA1P01562 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.03■□□□□ 0.16
IFNA1P01562 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IFNA1P01562 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFNA1P01562 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFNA1P01562 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.02■□□□□ 0.16
IFNA1P01562 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
IFNA1P01562 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
IFNA1P01562 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
IFNA1P01562 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
IFNA1P01562 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
IFNA1P01562 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
IFNA1P01562 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
IFNA1P01562 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
IFNA1P01562 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
IFNA1P01562 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
IFNA1P01562 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.02■□□□□ 0.16
IFNA1P01562 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.02■□□□□ 0.16
IFNA1P01562 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.02■□□□□ 0.16
IFNA1P01562 AL451085.2-201ENST00000605085 799 ntBASIC16.02■□□□□ 0.16
IFNA1P01562 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
IFNA1P01562 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
IFNA1P01562 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
IFNA1P01562 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
IFNA1P01562 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
IFNA1P01562 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
IFNA1P01562 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
IFNA1P01562 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
IFNA1P01562 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
IFNA1P01562 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
IFNA1P01562 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
IFNA1P01562 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
IFNA1P01562 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
IFNA1P01562 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
IFNA1P01562 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.02■□□□□ 0.15
IFNA1P01562 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms