Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
MT-CO1P00395 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MT-CO1P00395 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MT-CO1P00395 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MT-CO1P00395 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MT-CO1P00395 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-CO1P00395 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
MT-CO1P00395 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
MT-CO1P00395 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-CO1P00395 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-CO1P00395 ABHD17AP1-201ENST00000358206 933 ntBASIC20.75■□□□□ 0.91
MT-CO1P00395 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.75■□□□□ 0.91
MT-CO1P00395 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-CO1P00395 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.75■□□□□ 0.91
MT-CO1P00395 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MT-CO1P00395 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.75■□□□□ 0.91
MT-CO1P00395 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MT-CO1P00395 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
MT-CO1P00395 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.75■□□□□ 0.91
MT-CO1P00395 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-CO1P00395 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-CO1P00395 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MT-CO1P00395 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
MT-CO1P00395 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
MT-CO1P00395 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-CO1P00395 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
MT-CO1P00395 SLC25A24-204ENST00000569674 2357 ntBASIC20.74■□□□□ 0.91
MT-CO1P00395 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MT-CO1P00395 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MT-CO1P00395 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MT-CO1P00395 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MT-CO1P00395 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MT-CO1P00395 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MT-CO1P00395 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MT-CO1P00395 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MT-CO1P00395 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MT-CO1P00395 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MT-CO1P00395 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.74■□□□□ 0.91
MT-CO1P00395 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.74■□□□□ 0.91
MT-CO1P00395 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.74■□□□□ 0.91
MT-CO1P00395 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MT-CO1P00395 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MT-CO1P00395 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.74■□□□□ 0.91
MT-CO1P00395 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MT-CO1P00395 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-CO1P00395 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
MT-CO1P00395 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-CO1P00395 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-CO1P00395 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-CO1P00395 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.73■□□□□ 0.91
MT-CO1P00395 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.73■□□□□ 0.91
MT-CO1P00395 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MT-CO1P00395 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
MT-CO1P00395 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.73■□□□□ 0.91
MT-CO1P00395 MIR2861-201ENST00000636310 90 ntBASIC20.73■□□□□ 0.91
MT-CO1P00395 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MT-CO1P00395 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
MT-CO1P00395 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.73■□□□□ 0.91
MT-CO1P00395 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
MT-CO1P00395 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-CO1P00395 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-CO1P00395 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-CO1P00395 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MT-CO1P00395 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.73■□□□□ 0.91
MT-CO1P00395 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-CO1P00395 AL157384.1-201ENST00000445995 2473 ntBASIC20.72■□□□□ 0.91
MT-CO1P00395 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.72■□□□□ 0.91
MT-CO1P00395 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
MT-CO1P00395 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.72■□□□□ 0.91
MT-CO1P00395 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
MT-CO1P00395 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
MT-CO1P00395 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-CO1P00395 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-CO1P00395 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-CO1P00395 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-CO1P00395 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-CO1P00395 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-CO1P00395 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
MT-CO1P00395 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.72■□□□□ 0.91
MT-CO1P00395 PGM5P4-201ENST00000421970 445 ntBASIC20.72■□□□□ 0.91
MT-CO1P00395 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
MT-CO1P00395 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
MT-CO1P00395 C2orf69P4-201ENST00000565394 541 ntBASIC20.72■□□□□ 0.91
MT-CO1P00395 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-CO1P00395 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-CO1P00395 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
MT-CO1P00395 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.72■□□□□ 0.91
MT-CO1P00395 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-CO1P00395 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MT-CO1P00395 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-CO1P00395 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-CO1P00395 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
MT-CO1P00395 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
MT-CO1P00395 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MT-CO1P00395 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
MT-CO1P00395 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.71■□□□□ 0.91
MT-CO1P00395 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
MT-CO1P00395 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
MT-CO1P00395 AL121603.2-201ENST00000557373 2117 ntBASIC20.71■□□□□ 0.91
MT-CO1P00395 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms