Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLPTM1O96005 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPTM1O96005 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLPTM1O96005 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPTM1O96005 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPTM1O96005 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLPTM1O96005 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLPTM1O96005 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CLPTM1O96005 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.05■□□□□ 0.64
CLPTM1O96005 AL499627.2-201ENST00000606283 725 ntBASIC19.05■□□□□ 0.64
CLPTM1O96005 AC005837.3-201ENST00000612163 286 ntBASIC19.05■□□□□ 0.64
CLPTM1O96005 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
CLPTM1O96005 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CLPTM1O96005 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLPTM1O96005 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPTM1O96005 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPTM1O96005 AC120498.9-201ENST00000339021 3867 ntBASIC19.05■□□□□ 0.64
CLPTM1O96005 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPTM1O96005 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLPTM1O96005 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPTM1O96005 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPTM1O96005 AC133637.1-201ENST00000624115 1537 ntBASIC19.05■□□□□ 0.64
CLPTM1O96005 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPTM1O96005 AP004607.7-201ENST00000527152 1677 ntBASIC19.05■□□□□ 0.64
CLPTM1O96005 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.04■□□□□ 0.64
CLPTM1O96005 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
CLPTM1O96005 AC007613.1-201ENST00000572811 2597 ntBASIC19.04■□□□□ 0.64
CLPTM1O96005 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.04■□□□□ 0.64
CLPTM1O96005 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPTM1O96005 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CLPTM1O96005 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CLPTM1O96005 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLPTM1O96005 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPTM1O96005 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPTM1O96005 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPTM1O96005 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CLPTM1O96005 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPTM1O96005 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPTM1O96005 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLPTM1O96005 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLPTM1O96005 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLPTM1O96005 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.04■□□□□ 0.64
CLPTM1O96005 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.04■□□□□ 0.64
CLPTM1O96005 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.04■□□□□ 0.64
CLPTM1O96005 AC136469.2-201ENST00000623944 1028 ntBASIC19.04■□□□□ 0.64
CLPTM1O96005 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
CLPTM1O96005 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CLPTM1O96005 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.04■□□□□ 0.64
CLPTM1O96005 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPTM1O96005 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLPTM1O96005 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPTM1O96005 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLPTM1O96005 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPTM1O96005 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPTM1O96005 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
CLPTM1O96005 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.03■□□□□ 0.64
CLPTM1O96005 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPTM1O96005 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPTM1O96005 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPTM1O96005 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.03■□□□□ 0.64
CLPTM1O96005 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPTM1O96005 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.03■□□□□ 0.64
CLPTM1O96005 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.03■□□□□ 0.64
CLPTM1O96005 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.03■□□□□ 0.64
CLPTM1O96005 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.03■□□□□ 0.64
CLPTM1O96005 AC133561.4-201ENST00000566112 224 ntBASIC19.03■□□□□ 0.64
CLPTM1O96005 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLPTM1O96005 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.03■□□□□ 0.64
CLPTM1O96005 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.03■□□□□ 0.64
CLPTM1O96005 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.03■□□□□ 0.64
CLPTM1O96005 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPTM1O96005 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPTM1O96005 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPTM1O96005 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPTM1O96005 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CLPTM1O96005 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPTM1O96005 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPTM1O96005 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CLPTM1O96005 AC005332.8-201ENST00000622750 2735 ntBASIC19.02■□□□□ 0.64
CLPTM1O96005 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CLPTM1O96005 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLPTM1O96005 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLPTM1O96005 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLPTM1O96005 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.02■□□□□ 0.64
CLPTM1O96005 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLPTM1O96005 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLPTM1O96005 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
CLPTM1O96005 AL031432.3-201ENST00000607698 485 ntBASIC19.02■□□□□ 0.64
CLPTM1O96005 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLPTM1O96005 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.02■□□□□ 0.64
CLPTM1O96005 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.02■□□□□ 0.64
CLPTM1O96005 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLPTM1O96005 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CLPTM1O96005 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLPTM1O96005 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLPTM1O96005 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLPTM1O96005 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLPTM1O96005 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLPTM1O96005 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CLPTM1O96005 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms